Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is 148660096
Identifier: 148660096
GI number: 148660096
Start: 396709
End: 397449
Strand: Reverse
Name: 148660096
Synonym: MRA_0339
Alternate gene names: NA
Gene position: 397449-396709 (Counterclockwise)
Preceding gene: 148660101
Following gene: 148660095
Centisome position: 8.99
GC content: 68.15
Gene sequence:
>741_bases ATGGCCCGCAGCATTCCCGCGGACCGGTTTTCCGCGATTGTCGCCGCGTCGGCGCGGGTGTTCATCGCCCACGGTTACCA GCGCACCCAGGTGCAGGACGTGGCCGACGCACTCGCCCTGGCCAAAGGCACGCTGTATGGCTACGCCCAGGGCAAGGCTG CGCTGTTCGCGGCGGCGGTGCGCTACGGCGACGCTCAGGAAGCCCTTCCGCTGGCATCCGAACTGCCGGTGGCCGCTCCC GTTGCGGGCGAGATCGCAGCTGTGGTGTCGGCCCGACTGGCTGGCGAGGTCACCGACATGCGGCTCACGCACGCGTTGCG AGCGACTTTGCCGCCGGGTGCGACGACTGGAGACGCGCGAGCAGAACTCGCCGGTATCGTCACCGACCTCTACAGCCGCC TGGCCCGGCACCGGATCGCGCTCAAACTGGTCGACCGCTGTGCCCCCGAGCTACCCGACCTCGCCGAGGTTTGGTTCGGC ACCGGCCGGAACGCCCAAGTCGATGCGGTCCAGGCATACCTAGTGCACCGCGAGCGCGCCGGCCTTCTGATCCTGCCCGG GCCGGCACCGATGGTGGCCCGGACCATCGTCGAGTTGTGCGCGTTGTGGGCGGTGCATCTTCACTTCGACCCGTCACCGG AGCCTTGGTCGATCGTGCAACCTGGCGTGATCGATGACGATGCGATCGCTGCGACCCTCGCCGAGTTTGTCGTTCGGGCC ACCACAGCTTCTTCGGACTAA
Upstream 100 bases:
>100_bases TCGCATCGAGTTCCATATATCTTTGGAATATTAGATTCCGCCGCAGTCTTGCGCAAGGTCTTGGGGTGACTGACCGAGTC AGTCAAACTATTATCGGCCC
Downstream 100 bases:
>100_bases CCGCTTGCAACCGAAAGGTCGTCCCCATGCGCCTCACACATCCGGCCCGACGGTACCTATCCAGTCAGGCTGCCCGGCCA ACAGGCGCGTTCGGCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAVRYGDAQEALPLASELPVAAP VAGEIAAVVSARLAGEVTDMRLTHALRATLPPGATTGDARAELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFG TGRNAQVDAVQAYLVHRERAGLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPGVIDDDAIAATLAEFVVRA TTASSD
Sequences:
>Translated_246_residues MARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAVRYGDAQEALPLASELPVAAP VAGEIAAVVSARLAGEVTDMRLTHALRATLPPGATTGDARAELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFG TGRNAQVDAVQAYLVHRERAGLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPGVIDDDAIAATLAEFVVRA TTASSD >Mature_245_residues ARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAVRYGDAQEALPLASELPVAAPV AGEIAAVVSARLAGEVTDMRLTHALRATLPPGATTGDARAELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFGT GRNAQVDAVQAYLVHRERAGLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPGVIDDDAIAATLAEFVVRAT TASSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25933; Mature: 25802
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAV CCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHH RYGDAQEALPLASELPVAAPVAGEIAAVVSARLAGEVTDMRLTHALRATLPPGATTGDAR HCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFGTGRNAQVDAVQAYLVHRERA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCC GLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPGVIDDDAIAATLAEFVVRA CEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TTASSD HCCCCC >Mature Secondary Structure ARSIPADRFSAIVAASARVFIAHGYQRTQVQDVADALALAKGTLYGYAQGKAALFAAAV CCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHH RYGDAQEALPLASELPVAAPVAGEIAAVVSARLAGEVTDMRLTHALRATLPPGATTGDAR HCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AELAGIVTDLYSRLARHRIALKLVDRCAPELPDLAEVWFGTGRNAQVDAVQAYLVHRERA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCC GLLILPGPAPMVARTIVELCALWAVHLHFDPSPEPWSIVQPGVIDDDAIAATLAEFVVRA CEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TTASSD HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA