Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148659944
Identifier: 148659944
GI number: 148659944
Start: 212252
End: 213610
Strand: Reverse
Name: 148659944
Synonym: MRA_0188
Alternate gene names: NA
Gene position: 213610-212252 (Counterclockwise)
Preceding gene: 148659945
Following gene: 148659943
Centisome position: 4.83
GC content: 63.94
Gene sequence:
>1359_bases ATGTCTCAAGCGCAGCCGCGCCCCGCCGCACCCAACCCCAAGCGGAACGTCAAAGCGATTCGGACGGTGCGTTTCTGGAT GGCACCGATCGCCACCACGTTGGCCCTGATGTCGGCGCTGGCCGCGCTCTATCTGGGCGGCATCCTAAACCCCATGACCA ATTTGCGGCATTTCCCAATCGCGTTGGTGAACGAGGACGCCGGGCCCGCGGGCCAGCAGATTGTCGACGGTCTGGTTTCC GGCTTGGACAAGAACAAGTTCGACATCCGAGTGGTTTCGCCGGACGAGGCCAGGCGGCTGCTCGACACCGCGGCGGTGTA CGGCTCGGCGCTGATACCGCCGACCTTCTCGTCGCAGCTACGGGACTTCGGGGCGAGTGCGGTGACGCCAACCCGCACAG ACCGGCCCGCGATCACGATCTCAACGAATCCGCGGGCGGGCACGCTGGCAGCTAGCATCGCCGGCCAGACGCTGACCCGG GCACTGACGGTGGTCAACGGCAAAGTGGGCGAGCGACTTACCGCGGAGGTAGCGGCCCAGACCGGCGGTGTGGCACTGGC CGGGGCGGCGGCGGCCGGGCTGGCCAGTCCCATCGATGTCAAATCCACCGCCTATAACCCACTGCCCAACGGCACCGGCA ACGGGCTGTCGGCGTTTTACTACGCCCTCTTGCTGCTATTGGCGGGCTTTACCGGCAGCATCGTGGTGAGCACCCTGGTG GACTCGATGCTTGGCTATGTACCAGCCGAATTCGGCCCCGTCTATCGCTTCGCCGAGCAGGTCAACATCTCTCGCTTCCG TACGCTGTTGGTCAAGTGGGCGGTGATGGTGGTGCTGGCGTTGCTCACCTCGGGTGTCTACCTGGCGATCGCCCACGGCC TGGGCATGCCGATTCCGCTCGGGTGGCAAGTATGGCTCTACGGAGTATTCGCGATCATAGCGGTCGGCGTCACGTCCAGC TCGCTGATCGCGGTGCTGGGCTCGATGGGCCTGTTGGTCAGCATGTTGATCTTCGTCATCCTCGGATTGCCGTCGGCGGG CGCGACCGTCCCGCTGGAAGCCGTACCAGCGTTCTTCCGCTGGTTGGCTCAATTCGAGCCGATGCACCAGGTGTTCCTAG GTGTGCGGTCACTGCTGTATCTGAACGGAAACGCCGACGCCGGCCTGTCCCAGGCCCTGACCATGACGTCGATCGGGCTG ATCATCGGGCTGTTGCTGGGTGGATTCATCACACACCTGTACGACCGCAGCAGCTTCCACCGAATTCCGGGAGCGGTCGA GATGGCGATCGCCGTGGAACACCAAGCTCAATACCAAGCTCGCCAAAGCGCACGCGAAAGCTCAAGCGAACAACCGTAA
Upstream 100 bases:
>100_bases GCCTGACCGCCAATGAGCCGTCGGAAGTACTGATCTGGGAGATGCACGCGAAGCTGGGCGATTCGGCAACATAGAGTGGC CACGACAGACAGGAGCCCGC
Downstream 100 bases:
>100_bases TTCGAACGCGGCCGAACCGTCACGCAGCTGTTACTGAAGTTGACAGTGTGATCAGTGTGCCTAATGCTGGGATGGTTGCA TGTGGATTCGGGCCGAGAGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; ABC-2 Type Transporter Protein; YhgE/Pip Domain-Containing Protein; ABC Transporter Subunit
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVS GLDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTR ALTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLV DSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSS SLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGL IIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP
Sequences:
>Translated_452_residues MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVS GLDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTR ALTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLV DSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSS SLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGL IIGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP >Mature_451_residues SQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPIALVNEDAGPAGQQIVDGLVSG LDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQLRDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRA LTVVNGKVGERLTAEVAAQTGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLVD SMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPLGWQVWLYGVFAIIAVGVTSSS LIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFRWLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLI IGLLLGGFITHLYDRSSFHRIPGAVEMAIAVEHQAQYQARQSARESSSEQP
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47594; Mature: 47463
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE ALVNEDAGPAGQQIVDGLVSGLDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQL EEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHH RDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRALTVVNGKVGERLTAEVAAQ HHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLV CCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH DSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC GWQVWLYGVFAIIAVGVTSSSLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH WLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLIIGLLLGGFITHLYDRSSFH HHHHCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RIPGAVEMAIAVEHQAQYQARQSARESSSEQP HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQAQPRPAAPNPKRNVKAIRTVRFWMAPIATTLALMSALAALYLGGILNPMTNLRHFPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE ALVNEDAGPAGQQIVDGLVSGLDKNKFDIRVVSPDEARRLLDTAAVYGSALIPPTFSSQL EEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHH RDFGASAVTPTRTDRPAITISTNPRAGTLAASIAGQTLTRALTVVNGKVGERLTAEVAAQ HHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TGGVALAGAAAAGLASPIDVKSTAYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLV CCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH DSMLGYVPAEFGPVYRFAEQVNISRFRTLLVKWAVMVVLALLTSGVYLAIAHGLGMPIPL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC GWQVWLYGVFAIIAVGVTSSSLIAVLGSMGLLVSMLIFVILGLPSAGATVPLEAVPAFFR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH WLAQFEPMHQVFLGVRSLLYLNGNADAGLSQALTMTSIGLIIGLLLGGFITHLYDRSSFH HHHHCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RIPGAVEMAIAVEHQAQYQARQSARESSSEQP HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA