Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is yhhW [C]
Identifier: 148659945
GI number: 148659945
Start: 213637
End: 214371
Strand: Reverse
Name: yhhW [C]
Synonym: MRA_0189
Alternate gene names: 148659945
Gene position: 214371-213637 (Counterclockwise)
Preceding gene: 148659946
Following gene: 148659944
Centisome position: 4.85
GC content: 63.13
Gene sequence:
>735_bases ATGACCGCCACCGTCGAGATAAGGCGTGCGGCCGACCGGGCGGTCACCACGACGTCCTGGCTGAAATCCCGGCATTCGTT CTCATTCGGCGACCACTACGATCCCGACAACACCCACCACGGGCTCCTGTTGGTGAACAACGACGACCAAATGGAACCGG CTTCGGGTTTTGATCCCCATCCACACCGTGACATGGAAATCGTGACCTGGGTGCTGCGGGGAGCGCTCAGACACCAGGAT TCCGCCGGCAATAGCGGAGTGATCTATCCCGGTCTGGCCCAACGCATGTCGGCCGGCACCGGAATCTTGCATTCGGAAAT GAACGATTCTGCTACCGAGCCGGTGCATTTCGTGCAGATGTGGGTAATACCCGATGCAACCGGCATCACTGCCAGCTACC AACAGCAGGAGATAGACGACGAACTGTTGCGCGCCGGCCTGGTAACCATCGCGTCGGGCATACCCGGGCAAGACGCAGCG CTCACCCTGCATAACAGCAGCGCCTCGTTGCACGGCGCGCGGCTGCGGCCCGGCGCTACGGTCAGCCTGCCCTGCGCACC CTTCCTGCATCTGTTCGTCGCCTACGGCCGCCTCACTCTGGAAGGTGGCGGCGAGCTTGCCGACGGGGACGCGGTGCGGT TCACCGACGCTGACGCCCGCGGCCTGACCGCCAATGAGCCGTCGGAAGTACTGATCTGGGAGATGCACGCGAAGCTGGGC GATTCGGCAACATAG
Upstream 100 bases:
>100_bases ATGGCCGCCGACCGCGTGTCACACGTGGTGGCCTTCCTCGACACCACCTTGTTCCCGAAATTCGGCCTGCCCGATTCGCT GTGATGGCGAACGTGACGTC
Downstream 100 bases:
>100_bases AGTGGCCACGACAGACAGGAGCCCGCATGTCTCAAGCGCAGCCGCGCCCCGCCGCACCCAACCCCAAGCGGAACGTCAAA GCGATTCGGACGGTGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein Rv0181c/MT0190
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQD SAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAA LTLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLG DSAT
Sequences:
>Translated_244_residues MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQD SAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAA LTLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLG DSAT >Mature_243_residues TATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDS AGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAAL TLHNSSASLHGARLRPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLGD SAT
Specific function: Putative quercetin 2,3-dioxygenase
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family
Homologues:
Organism=Homo sapiens, GI66363697, Length=197, Percent_Identity=30.4568527918782, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4505823, Length=197, Percent_Identity=30.4568527918782, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1789847, Length=232, Percent_Identity=35.3448275862069, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1789493, Length=103, Percent_Identity=32.0388349514563, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y181_MYCTU (P65724)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: H70905 - RefSeq: NP_214695.1 - RefSeq: NP_334596.1 - ProteinModelPortal: P65724 - SMR: P65724 - EnsemblBacteria: EBMYCT00000001653 - EnsemblBacteria: EBMYCT00000069172 - GeneID: 886788 - GeneID: 923072 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0190 - KEGG: mtu:Rv0181c - TIGR: MT0190 - TubercuList: Rv0181c - GeneTree: EBGT00050000015891 - HOGENOM: HBG370454 - OMA: YAYVHVA - ProtClustDB: CLSK2748589 - GO: GO:0005829 - InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10 - PANTHER: PTHR13903 - PIRSF: PIRSF006232
Pfam domain/function: PF02678 Pirin; SSF51182 RmlC_like_cupin
EC number: =1.13.11.24
Molecular weight: Translated: 26287; Mature: 26155
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPH CCCEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQM CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCEEECCCCCCCCCCEEEEEE WVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGARLRPGAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEECCCCE VSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLG EECCHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC DSAT CCCC >Mature Secondary Structure TATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPH CCEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC PHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQM CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCEEECCCCCCCCCCEEEEEE WVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGARLRPGAT EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEECCCCE VSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLG EECCHHHHHHHHHHHCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC DSAT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036