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The map label for this gene is glcD [H]

Identifier: 148659925

GI number: 148659925

Start: 191967

End: 193316

Strand: Direct

Name: glcD [H]

Synonym: MRA_0169

Alternate gene names: 148659925

Gene position: 191967-193316 (Clockwise)

Preceding gene: 148659922

Following gene: 148659927

Centisome position: 4.34

GC content: 67.7

Gene sequence:

>1350_bases
ATGCTAACCAGCTTGGTGAGTGCGGTCGGATCGCATCACGTCACCACCGACCCTGACGTGCTGGCCGGCCGCAGCGTCGA
CCACACCGGCCGCTATCGGGGCCGGGCCAGCGCGCTGGTGCGGCCCGGCTCGGCTGAAGAGGTCGCCGAAGTGCTGCGGG
TGTGCCGGGACGCTGGAGCCTATGTCACCGTTCAAGGCGGCCGCACCTCACTGGTGGCGGGCACCGTTCCCGAACACGAC
GACGTGCTGCTGTCTACCGAACGGCTTTGCGTCGTCAGCGATGTCGATACCGTTGAGCGCCGAATCGAGATCGGTGCCGG
GGTCACACTGGCCGCGGTGCAGCACGCCGCGTCAACGGCTGGGCTGGTGTTCGGCGTGGATTTGTCGGCCCGGGATACCG
CGACCGTCGGTGGCATGGCCTCGACGAACGCCGGCGGATTGCGCACGGTCCGTTACGGCAACATGGGCGAGCAGGTTGTC
GGGCTAGACGTCGCGCTGCCCGACGGTACGGTGCTGCGCCGGCACAGCCGGGTGCGTCGCGACAACACCGGCTACGACCT
GCCCGCGCTGTTCGTCGGGGCCGAAGGCACCCTGGGGGTTATCACCGCGCTGGATCTGCGGCTGCACCCCACCCCGTCGC
ATCGGGTGACAGCCGTGTGCGGGTTCGCCGAGCTGGCAGCGCTGGTCGATGCCGGCCGAATGTTCCGCGACGTGGAGGGC
ATCGCGGCGTTGGAATTGATTGACGGTCGGGCCGCCGCGCTAACCCGTGAACATCTTGGCGTTCGCCCCCCCGTCGAGGC
TGACTGGTTGCTATTGGTGGAACTGGCCGCCGACCACGATCAGACCGACCGGCTCGCCGACCTGCTCGGCGGTGCACGGA
TGTGCGGGGAGCCCGCGGTCGGTGTGGATGCCGCTGCGCAGCAACGGTTGTGGCGCACCCGTGAATCGCTGGCCGAGGTG
CTCGGTGTGTACGGCCCGCCGCTGAAGTTCGACGTCTCGCTGCCATTGTCGGCGATCAGCGGCTTCGCCCGAGATGCGGT
CGCGTTGGTTCACCGACACGTCCCGGATTCTCCGGAGGCGTTGCCGCTGTTGTTCGGTCACATCGGTGAGGGCAACCTGC
ACCTGAACGTGCTGCGTTGCCCGCCTGATCGGGAACCGGCGTTGTACGCAAAGATGATGGGCCTCATCGCCGAATGCGGC
GGTAACGTCAGTTCAGAACATGGGGTGGGCAGCCGCAAGCGTGCCTACCTGGGAATGTCCCGGCAGGCCAACGACGTCGC
CGCGATGCGGAGGGTCAAGGCGGCGTTGGACCCGACCGGGTACCTTAACGCCGCGGTCTTGTTCGACTGA

Upstream 100 bases:

>100_bases
TTAGGTACTTAACGAGAGTAAGGCGGTCCTGCCGCTACGTCCGGCGTTTGGACAAACCTCGATGACTGCCTGACCTATGG
CGGCTGCTATAACCGCGAGC

Downstream 100 bases:

>100_bases
CCGGTGCTGCGCAAGCATTCAGCGCCTTTAGAGATCACCGGTGAAACTGATGAGCTGACGCACCGCGATGCCATCGGCGA
GGTGGTCCATCGCCTCGTTG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGAYVTVQGGRTSLVAGTVPEHD
DVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVV
GLDVALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEG
IAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQTDRLADLLGGARMCGEPAVGVDAAAQQRLWRTRESLAEV
LGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAECG
GNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD

Sequences:

>Translated_449_residues
MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGAYVTVQGGRTSLVAGTVPEHD
DVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVV
GLDVALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEG
IAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQTDRLADLLGGARMCGEPAVGVDAAAQQRLWRTRESLAEV
LGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAECG
GNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD
>Mature_449_residues
MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGAYVTVQGGRTSLVAGTVPEHD
DVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVV
GLDVALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEG
IAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQTDRLADLLGGARMCGEPAVGVDAAAQQRLWRTRESLAEV
LGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAECG
GNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=441, Percent_Identity=36.0544217687075, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI37595756, Length=461, Percent_Identity=29.2841648590022, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI37595754, Length=486, Percent_Identity=28.3950617283951, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI4501993, Length=191, Percent_Identity=25.130890052356, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1789351, Length=444, Percent_Identity=28.3783783783784, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI48994907, Length=497, Percent_Identity=22.7364185110664, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534361, Length=441, Percent_Identity=28.7981859410431, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71992373, Length=468, Percent_Identity=27.1367521367521, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=468, Percent_Identity=27.1367521367521, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71992392, Length=363, Percent_Identity=28.099173553719, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=204, Percent_Identity=24.0196078431373, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6320023, Length=448, Percent_Identity=32.5892857142857, Blast_Score=237, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6320764, Length=449, Percent_Identity=31.1804008908686, Blast_Score=219, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6320027, Length=442, Percent_Identity=26.6968325791855, Blast_Score=141, Evalue=2e-34,
Organism=Drosophila melanogaster, GI18921117, Length=454, Percent_Identity=33.920704845815, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24639277, Length=454, Percent_Identity=33.920704845815, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24639275, Length=454, Percent_Identity=33.920704845815, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24653753, Length=189, Percent_Identity=27.5132275132275, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 47357; Mature: 47357

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGA
CHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCC
YVTVQGGRTSLVAGTVPEHDDVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTA
EEEEECCCEEEEECCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCC
GLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVVGLDVALPDGTVLRRHSRVRR
CEEEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHC
DNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEG
CCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
IAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQTDRLADLLGGARMCGEPAV
CEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHCCCCCC
GVDAAAQQRLWRTRESLAEVLGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEA
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
LPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAECGGNVSSEHGVGSRKRAYLGMS
HHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
RQANDVAAMRRVKAALDPTGYLNAAVLFD
CCCHHHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGA
CHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCC
YVTVQGGRTSLVAGTVPEHDDVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTA
EEEEECCCEEEEECCCCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCC
GLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVVGLDVALPDGTVLRRHSRVRR
CEEEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHC
DNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEG
CCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
IAALELIDGRAAALTREHLGVRPPVEADWLLLVELAADHDQTDRLADLLGGARMCGEPAV
CEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHCCCCCC
GVDAAAQQRLWRTRESLAEVLGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEA
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
LPLLFGHIGEGNLHLNVLRCPPDREPALYAKMMGLIAECGGNVSSEHGVGSRKRAYLGMS
HHHHEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
RQANDVAAMRRVKAALDPTGYLNAAVLFD
CCCHHHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]