| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148659860
Identifier: 148659860
GI number: 148659860
Start: 108958
End: 109509
Strand: Direct
Name: 148659860
Synonym: MRA_0102
Alternate gene names: NA
Gene position: 108958-109509 (Clockwise)
Preceding gene: 148659859
Following gene: 148659861
Centisome position: 2.47
GC content: 59.06
Gene sequence:
>552_bases ATGAGCCACACCGACTTGACGCCCTGCACACGGGTGCTGGCATCCAGCGGCACGGTTCCGATCGCAGAGGAACTGCTGGC CAGAGTGCTCGAGCCCTACTCCTGCAAAGGATGTCGCTACCTCATCGACGCACAGTACAGCGCCACCGAGGATTCGGTTC TTGCCTATGGCAACTTCACGATCGGTGAGTCCGCCTATATTCGAAGCACGGGGCACTTCAACGCGGTCGAACTGATTCTG TGTTTCAATCAGCTCGCCTACAGCGCCTTCGCTCCGGCCGTCCTCAACGAGGAAATCCGGGTGCTTCGCGGCTGGTCGAT CGACGACTACTGCCAACACCAGCTCTCTAGCATGCTGATCAGGAAGGCATCATCGCGGTTCAGAAAACCGCTGAACCCGC AAAAGTTCTCTGCCCGCCTCCTGTGTCGAGATCTGCAGGTCATCGAACGAACCTGGCGCTATCTCAAGGTCCCGTGCGTC ATCGAGTTCTGGGACGAGAACGGCGGGGCGGCGTCCGGTGAGATCGAACTAGCGGCCCTCAACATTCCGTAA
Upstream 100 bases:
>100_bases GGGTTCTCATGCACCGAGCGAAGCACGGCAGCGCCGCGGGCACTCTGACGACCTACCGCCTGACCATGCTTGATGGCCTC AAGACGCCGGGATACGCGGC
Downstream 100 bases:
>100_bases TCCAATGGGAGGAAAGAAGTTTCAAGCTATGCCTCAGTTGCCATCTACCGTGCTGGACCGGGTCTTCGAGCAGGCACGGC AGCAGCCGGAAGCAATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELIL CFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCV IEFWDENGGAASGEIELAALNIP
Sequences:
>Translated_183_residues MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELIL CFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCV IEFWDENGGAASGEIELAALNIP >Mature_182_residues SHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILC FNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVI EFWDENGGAASGEIELAALNIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y098_MYCTU (P64685)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: B70751 - RefSeq: NP_214612.1 - RefSeq: NP_334515.1 - PDB: 2PFC - PDBsum: 2PFC - ProteinModelPortal: P64685 - SMR: P64685 - EnsemblBacteria: EBMYCT00000000883 - EnsemblBacteria: EBMYCT00000071311 - GeneID: 886935 - GeneID: 922936 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0107 - KEGG: mtu:Rv0098 - TIGR: MT0107 - TubercuList: Rv0098 - GeneTree: EBGT00050000017534 - HOGENOM: HBG567533 - OMA: VLEPYSY - ProtClustDB: CLSK790262 - InterPro: IPR022598
Pfam domain/function: PF10862 DUF2662
EC number: NA
Molecular weight: Translated: 20529; Mature: 20397
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFT CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCEE IGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLI ECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVIEFWDENGGAASGEIELAAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCEEEEEEE NIP CCC >Mature Secondary Structure SHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFT CCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCEE IGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLI ECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVIEFWDENGGAASGEIELAAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCEEEEEEE NIP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036