| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148659808
Identifier: 148659808
GI number: 148659808
Start: 53186
End: 54055
Strand: Reverse
Name: 148659808
Synonym: MRA_0051
Alternate gene names: NA
Gene position: 54055-53186 (Counterclockwise)
Preceding gene: 148659826
Following gene: 148659807
Centisome position: 1.22
GC content: 65.86
Gene sequence:
>870_bases GTGGCGAAGTGGCTGGGCGCACCCCTTGCGCGCGGAGTATCGACGGCAACCCGCGCCAAAGACAGCGACCGGCAGGACGC CTGCCGGATTCTCGACGACGCCCTGCGTGACGGCGAGCTCTCGATGGAGGAACACCGGGAGCGCGTCAGCGCAGCTACCA AGGCTGTGACCCTAGGTGACCTGCAGCGTCTGGTGGCCGACCTGCAGGTCGAGAGCGCACCCGCACAAATGCCCGCGCTC AAATCGCGGGCGAAACGCACCGAGTTGGGCTTGCTGGCCGCTGCGTTTGTCGCATCGGTGCTGCTGGGCGTCGGCATCGG CTGGGGCGTGTACGGCAACACCCGCTCTCCGCTGGACTTCACCTCGGATCCCGGAGCAAAGCCCGACGGGATCGCCCCCG TGGTGCTGACCCCGCCCAGGCAGCTGCATTCCCTCGGCGGGCTCACCGGCCTGCTGGAGCAGACCCGCAAGCGGTTCGGC GACACCATGGGCTACCGGCTGGTGATCTACCCGGAGTATGCGTCGCTCGATCGCGTCGACCCGGCGGACGACCGCCGAGT CCTGGCGTATACCTACCGCGGCGGCTGGGGCGATGCGACCAGTTCCGCCAAGAGCATTGCCGACGTGTCCGTGGTTGACC TGAGCAAATTCGATGCGAAGACCGCTGTGGGCATCATGCGCGGCGCCCCGGAAACCCTCGGCCTCAAACAATCCGACGTC AAAAGCATGTACCTGATCGTCGAACCGGTCAAGGACCCCACCACGCCGGCTGCGTTGTCGTTGTCGTTGTATGTCTCTAG CGACTACGGCGGTGGATACCTCGTTTTCGCAGGTGACGGCACCATCAAGCACGTCAGCTACCCGTCTTGA
Upstream 100 bases:
>100_bases ACGACGCCATCCACACCACCGATACGCAACCGGCGCCGTTGTTGCGCGGGTACGGCGGGATCGAGTTCAGATTCCCAGCC AGACTCCTACTATCGTCCCT
Downstream 100 bases:
>100_bases CGCGGTGATGTTGTCGCAAATATATCGAGGCGATACGATGACGCGAGGCGTCGAACCGTCGTAACGGCCATTCAAAAGCC ATACAAAAGGAGGTGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPAL KSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFG DTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDV KSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS
Sequences:
>Translated_289_residues MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPAL KSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFG DTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDV KSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS >Mature_288_residues AKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAPAQMPALK SRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGD TMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDVK SMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y048_MYCTU (P71705)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: H70912 - RefSeq: NP_214562.1 - RefSeq: NP_334462.1 - EnsemblBacteria: EBMYCT00000001330 - EnsemblBacteria: EBMYCT00000071015 - GeneID: 887027 - GeneID: 922698 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0054 - KEGG: mtu:Rv0048c - TIGR: MT0054 - TubercuList: Rv0048c - GeneTree: EBGT00050000016349 - HOGENOM: HBG658416 - OMA: GGWGDPT - ProtClustDB: CLSK790222 - InterPro: IPR012551
Pfam domain/function: PF08044 DUF1707
EC number: NA
Molecular weight: Translated: 30817; Mature: 30686
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1afd5f64)-; HASH(0x1ae4f3c0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGD CCCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVD CCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDV CCCCCEEEEEEECCCCCCCHHHHHHHHCEEEEEHHHHHHHHHHHHHCCCCHHCCCCHHCC KSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS CEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCH >Mature Secondary Structure AKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGD CCCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LQRLVADLQVESAPAQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVD CCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDV CCCCCEEEEEEECCCCCCCHHHHHHHHCEEEEEHHHHHHHHHHHHHCCCCHHCCCCHHCC KSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS CEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036