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The map label for this gene is yqgE [C]

Identifier: 148659798

GI number: 148659798

Start: 42662

End: 43270

Strand: Direct

Name: yqgE [C]

Synonym: MRA_0041

Alternate gene names: 148659798

Gene position: 42662-43270 (Clockwise)

Preceding gene: 148659795

Following gene: 148659801

Centisome position: 0.97

GC content: 65.35

Gene sequence:

>609_bases
GTGGTGGCGCCGCACGAAGACCCCGAGGACCATGTCGCACCCGCCGCACAACGGGTGCGAGCGGGCACCTTATTGTTGGC
CAACACCGATCTCCTTGAACCGACATTTCGCCGCAGTGTGATCTACATCGTGGAGCACAACGACGGCGGCACCCTCGGTG
TGGTCCTCAATCGGCCCAGCGAAACCGCGGTCTACAACGTGTTGCCGCAGTGGGCCAAACTCGCGGCCAAGCCAAAGACA
ATGTTCATCGGTGGGCCGGTGAAGCGCGACGCGGCGCTGTGTCTGGCGGTATTGCGGGTTGGCGCTGACCCGGAAGGCGT
GCCGGGCCTAAGGCATGTCGCGGGCAGGCTGGTGATGGTCGATCTGGATGCCGACCCCGAGGTGCTCGCAGCGGCGGTGG
AAGGGGTGCGCATCTACGCCGGGTACTCCGGCTGGACCATCGGTCAGCTCGAAGGTGAAATCGAGCGCGACGACTGGATT
GTGTTGTCGGCGTTGCCATCTGACGTTTTGGTGGGGCCGAGAGCCGACCTGTGGGGGCAGGTGCTGCGACGGCAGCCGCT
GCCGCTGTCGCTGCTGGCCACCCACCCGATCGATCTGAGCCGGAACTAG

Upstream 100 bases:

>100_bases
GGCAAGGTTCGGTCCACCCCGTGCCGCCCCAACCACAGTACAAATATTCGCCGACCCTGCTTGTTCGCCCCGGGCGATGC
GACGGTGGTGCGATGATGGT

Downstream 100 bases:

>100_bases
GCTACTCCGCCGCCGAGCTTGCCAGAGCAGCGCGTCGCGTCGCCGCGGTCGAGCCAGGCGATCCGGCCCAGCCTAGTGGG
CCACAGGCTGTTCAATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT
MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWI
VLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN

Sequences:

>Translated_202_residues
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT
MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWI
VLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN
>Mature_202_residues
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKT
MFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWI
VLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=170, Percent_Identity=28.2352941176471, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y038_MYCTU (P67757)

Other databases:

- EMBL:   BX842572
- EMBL:   AE000516
- PIR:   D70702
- RefSeq:   NP_214552.1
- RefSeq:   NP_334452.1
- ProteinModelPortal:   P67757
- SMR:   P67757
- EnsemblBacteria:   EBMYCT00000001659
- EnsemblBacteria:   EBMYCT00000071342
- GeneID:   887045
- GeneID:   922630
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0043
- KEGG:   mtu:Rv0038
- TIGR:   MT0043
- TubercuList:   Rv0038
- GeneTree:   EBGT00050000016890
- HOGENOM:   HBG530212
- OMA:   FAGYAGW
- ProtClustDB:   PRK00228
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 21808; Mature: 21808

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS
CCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCC
ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV
CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEE
DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ
EECCCHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCHHHHHH
VLRRQPLPLSLLATHPIDLSRN
HHHCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPS
CCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCC
ETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMV
CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEE
DLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQ
EECCCHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCHHHHHH
VLRRQPLPLSLLATHPIDLSRN
HHHCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036