Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is proP [H]
Identifier: 148653530
GI number: 148653530
Start: 2143671
End: 2144978
Strand: Direct
Name: proP [H]
Synonym: PsycPRwf_1733
Alternate gene names: 148653530
Gene position: 2143671-2144978 (Clockwise)
Preceding gene: 148653529
Following gene: 148653531
Centisome position: 71.96
GC content: 43.5
Gene sequence:
>1308_bases ATGCCTTTTGTTGCCTTATCAGATTCCCAAAGCTCGGTGTCCCCAAAGCAATTAATGGTTATTTGCTTTGGTAATGCGGT CGCCTATTTTGATTTTCTAATCTATCTTTTTATGGCAGATATCATTAGCGCCACTTTTTTTCCGGCCAATGATGATCCGT TACTCGCCAAGCTACAAGCACTTACCATATTTATCGCCGGTTATTTAACTCGGCCCATTGGGGCGCTGCTGCTGGGCCGT TATGCCGATGTCAAAGGCCGCAAACCTGCGCTTTTAATCAGCATCTCATTTATTGCTGCGACGGCACTTATTACCGCTTG CCTGCCGACATACTCCCAAGTAGGCATTTTGGCACCCATCTTATTCTTTATCGCACGTATGTTTCAGGGCATGGCCTTTG GTGCGCACACCCCCTTAGGCTGGGTGTATATTGCTGAGCATGTAGACAAGCGTAATCTGGCCACTTACTTAAGCTTTGTT ACCGCAAGCTTTATGCTTGGTGAGCTGGGCTCAAACTTATTATTTGAAGTAATTACCAACACCCATACGCCCACTGAGCT TATCGAAAGTGGTTGGCGTATTCCTTTTGTTTGGGGCGCTACGCTCAGTTTTGTGTCTTTGATGTTGTGGCACACTTTAC CTGAGACGCCTATCTTTACCGCTCAAAAATGCAAACAGAAGTTTATGCCCAAAATATCTGAGATTGGGCCGTCATTTAAG CGCTTTAATGCCATTTTCTTAGCCTTAGTACTGACCTTTATTATCAGTAGCTTGACAATGGTTGTGGCCTTGCTATTACC GCAGCTAATTTCTATGAAGTTTAGTATTGATGAGTCTATGCTTAGCTTCTCAAATAATTTGGGCTTACTGTTTTTAATGA TTGGTTGTATATTTTTTGGGTTAGTCGCAGATAAAAGCAGCACCGGTAAGGCTTTGATGATTGGCTCAATAGCCTTGACC TTGCAGGCTTTAGCCTTTTATTACCACTTAGAAAACGGCGGTGGTGCGTTTATCTTATTTATGTACGCCATTTTAGGGTT CTGTACGGGTATTATTAGCCTAGGCTCCGTCATCTTAGTACAGTTATTTCCTACTGAGGTTCGAGTCGCCGCCGTTTCGC TCACTTATAACTTTATGTATGCGATAGTGGGGGTATCCCTACCCTTTGGTCTGGTCTATGCCACCAACTTGGTCAGCATC TCGCCAGCGTTATACATTATCTTTGTGAGTATCGTCACCTTTATTATCGGGCTATATATTTACCGTTTGCCTAAGTTTAA GTCGCTCGATGCATCTATTAAGCTATAG
Upstream 100 bases:
>100_bases GGCTGTTGTAAGTTTTATACCCCTTATTTGATTAGCAGACGCGTCCTATCCGTTACGCTTAGGATGCTCATTTTACTTTT AATCACTCGATACCTTTACT
Downstream 100 bases:
>100_bases CTAATATAAACACAAAAGCCAAAAATCGGCTCAAGCAGGTCATGATATAATGATCACTTGAGCCTTTTGCTGCTCAAGCT GTCTGCTACAAACCCTATCG
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPFVALSDSQSSVSPKQLMVICFGNAVAYFDFLIYLFMADIISATFFPANDDPLLAKLQALTIFIAGYLTRPIGALLLGR YADVKGRKPALLISISFIAATALITACLPTYSQVGILAPILFFIARMFQGMAFGAHTPLGWVYIAEHVDKRNLATYLSFV TASFMLGELGSNLLFEVITNTHTPTELIESGWRIPFVWGATLSFVSLMLWHTLPETPIFTAQKCKQKFMPKISEIGPSFK RFNAIFLALVLTFIISSLTMVVALLLPQLISMKFSIDESMLSFSNNLGLLFLMIGCIFFGLVADKSSTGKALMIGSIALT LQALAFYYHLENGGGAFILFMYAILGFCTGIISLGSVILVQLFPTEVRVAAVSLTYNFMYAIVGVSLPFGLVYATNLVSI SPALYIIFVSIVTFIIGLYIYRLPKFKSLDASIKL
Sequences:
>Translated_435_residues MPFVALSDSQSSVSPKQLMVICFGNAVAYFDFLIYLFMADIISATFFPANDDPLLAKLQALTIFIAGYLTRPIGALLLGR YADVKGRKPALLISISFIAATALITACLPTYSQVGILAPILFFIARMFQGMAFGAHTPLGWVYIAEHVDKRNLATYLSFV TASFMLGELGSNLLFEVITNTHTPTELIESGWRIPFVWGATLSFVSLMLWHTLPETPIFTAQKCKQKFMPKISEIGPSFK RFNAIFLALVLTFIISSLTMVVALLLPQLISMKFSIDESMLSFSNNLGLLFLMIGCIFFGLVADKSSTGKALMIGSIALT LQALAFYYHLENGGGAFILFMYAILGFCTGIISLGSVILVQLFPTEVRVAAVSLTYNFMYAIVGVSLPFGLVYATNLVSI SPALYIIFVSIVTFIIGLYIYRLPKFKSLDASIKL >Mature_434_residues PFVALSDSQSSVSPKQLMVICFGNAVAYFDFLIYLFMADIISATFFPANDDPLLAKLQALTIFIAGYLTRPIGALLLGRY ADVKGRKPALLISISFIAATALITACLPTYSQVGILAPILFFIARMFQGMAFGAHTPLGWVYIAEHVDKRNLATYLSFVT ASFMLGELGSNLLFEVITNTHTPTELIESGWRIPFVWGATLSFVSLMLWHTLPETPIFTAQKCKQKFMPKISEIGPSFKR FNAIFLALVLTFIISSLTMVVALLLPQLISMKFSIDESMLSFSNNLGLLFLMIGCIFFGLVADKSSTGKALMIGSIALTL QALAFYYHLENGGGAFILFMYAILGFCTGIISLGSVILVQLFPTEVRVAAVSLTYNFMYAIVGVSLPFGLVYATNLVSIS PALYIIFVSIVTFIIGLYIYRLPKFKSLDASIKL
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=424, Percent_Identity=29.9528301886792, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1788942, Length=413, Percent_Identity=29.0556900726392, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1789941, Length=396, Percent_Identity=28.5353535353535, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788292, Length=383, Percent_Identity=27.154046997389, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI87082404, Length=408, Percent_Identity=23.5294117647059, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47721; Mature: 47589
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVALSDSQSSVSPKQLMVICFGNAVAYFDFLIYLFMADIISATFFPANDDPLLAKLQA CCEEEECCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LTIFIAGYLTRPIGALLLGRYADVKGRKPALLISISFIAATALITACLPTYSQVGILAPI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LFFIARMFQGMAFGAHTPLGWVYIAEHVDKRNLATYLSFVTASFMLGELGSNLLFEVITN HHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC THTPTELIESGWRIPFVWGATLSFVSLMLWHTLPETPIFTAQKCKQKFMPKISEIGPSFK CCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHCCHHH RFNAIFLALVLTFIISSLTMVVALLLPQLISMKFSIDESMLSFSNNLGLLFLMIGCIFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVADKSSTGKALMIGSIALTLQALAFYYHLENGGGAFILFMYAILGFCTGIISLGSVILV HHCCCCCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLFPTEVRVAAVSLTYNFMYAIVGVSLPFGLVYATNLVSISPALYIIFVSIVTFIIGLYI HHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRLPKFKSLDASIKL HHCCCCCCCCCCCCC >Mature Secondary Structure PFVALSDSQSSVSPKQLMVICFGNAVAYFDFLIYLFMADIISATFFPANDDPLLAKLQA CEEEECCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LTIFIAGYLTRPIGALLLGRYADVKGRKPALLISISFIAATALITACLPTYSQVGILAPI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LFFIARMFQGMAFGAHTPLGWVYIAEHVDKRNLATYLSFVTASFMLGELGSNLLFEVITN HHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC THTPTELIESGWRIPFVWGATLSFVSLMLWHTLPETPIFTAQKCKQKFMPKISEIGPSFK CCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHCCHHH RFNAIFLALVLTFIISSLTMVVALLLPQLISMKFSIDESMLSFSNNLGLLFLMIGCIFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVADKSSTGKALMIGSIALTLQALAFYYHLENGGGAFILFMYAILGFCTGIISLGSVILV HHCCCCCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLFPTEVRVAAVSLTYNFMYAIVGVSLPFGLVYATNLVSISPALYIIFVSIVTFIIGLYI HHCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRLPKFKSLDASIKL HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]