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The map label for this gene is ymdC [H]

Identifier: 148653529

GI number: 148653529

Start: 2141950

End: 2143581

Strand: Direct

Name: ymdC [H]

Synonym: PsycPRwf_1732

Alternate gene names: 148653529

Gene position: 2141950-2143581 (Clockwise)

Preceding gene: 148653528

Following gene: 148653530

Centisome position: 71.9

GC content: 43.87

Gene sequence:

>1632_bases
ATGTTAGCGGTATTGCTCAGCGCTTGTAATACCTTACCAAAACAGCCACATTTAAATCAAAGCATTCAATTAACCCAGCG
CTTACAGGCTAATTACAATACACACTTACAGCCAGCCTTGCCCAGTAACGCCACCGCTGCCGAGATAGAGCTGGACAAAA
AAGCACAATTGTCACGCGCAATTGACCAGCAAAGCGAAGCCCATCCGCATTTATCGGGTTACCACACCATCATCACAGGT
GCCAACGCCTTTGCTGCCCGCAGTATTTTGACCGATAGAGCCAGCAAAAGTATCGATGTGCAGTACTATATCTGGCACAA
CGATCAAGCTGGGCAATTATTATTAAAAAAATTATGGCAAGCGGCAGATCGCGGCGTCATCGTGCGCTTTTTATTAGATG
ATTTTAATAACAATGCTGCGCTAGATAAGCACTTACTGCGCTTTGCCAGCCACCCTAATATCGCAGTCCGCTTAATCAAT
CCGCTCACCCATCGTAAGTTTCAGACCCTCAACTATTTAGTCAGTCTAAAGCGAATTAACCACCGCATGCACAATAAAAG
CATGACCTTTGATCGCAAACTCAGTATCATTGGTGGCCGCAATGTGGGCAATGAGTATTTAAGTAATGATAAAAACACTC
AATTTGCGGATCTTGATGTGCTGTTAATAGGCAATGTGGTCGACGATGTGACACACAGCTTCGATCAGTATTGGGACTCA
GGTTTGTCTTATGATATTGAGACCTTAGTAAAAGGCAAAGCTAACAAACCGATAAACTATGATAAACAAACCAGCTCCGA
GCAGTTTTTCAATAGTTTGGAGAAAATAAACCCACAGAACCCACAGACAGCCGAAGAGGCGCTCAATGCTTATAATCGTG
CCTTGGCCAACTCTACCATTGATACTGACTTAATAAATAAAAGAGTGCCTTTTCGCTGGGCTCCCATGACTTTTTTGAGT
GATGATGTTAAAAAACTGGTTCAAAAAGCAGATCCTGAAAGCCATTTAGTGGTACAGCTTAGAGATCTGCTGGGCACGCC
CACTAAGCAGCTGTCTATCGTTTCTTCGTACTTTGTGCCCACCAAAGATGGGGTAAATACTTTAATTGAGCTTGCTAAAC
AGGGCGTTAAGGTTAGAATACTCACCAACTCTTTTAATGCCACTGACGTTTCGGCAGTTCATGCCGGTTATGCTCAGTGG
CGTGTGGCCCTATTAAGAGCGGGTATTGAAATCTATGAATTAAAGGCCACAGCGTCTGAAGAAGATAGAGAAAATAAGCT
GTGGCGGGCTCGCTCTCAGTCATCTACGAGCCTACATGCCAAAGCTTTTGCTGTCGATGATCACAATGTGTTCATCGGCT
CCTATAATGTCGACCCCAGATCAGCCAATATTAATACTGAGATGGGCGTGGTCATTGAAGATGATGCGTTGGCCAAAAAA
TTGCATGCTGCTATTAGTGACCAGTTATTATCGCAAGCTTACAAGGTCATCTTGACCCCAACCGGTCAACTGCAGTGGCA
AACTTTGGAAAATACTGAGCTGGTTATTTATGAGCAAGAGCCGCACATAGACTTAATAGATTCATTATGGATTAATGTCA
TGTCCTCGATGCCCATTGACTGGCTGTTGTAA

Upstream 100 bases:

>100_bases
CCACTCTTTTGAGTCCTTATTACTGGCCGACTCACGAATGTTAACCATCCCTCTACCCAACTTGAGTATCTATGGGCTAG
CTAAGCTGCTGTGTGTGGCG

Downstream 100 bases:

>100_bases
GTTTTATACCCCTTATTTGATTAGCAGACGCGTCCTATCCGTTACGCTTAGGATGCTCATTTTACTTTTAATCACTCGAT
ACCTTTACTATGCCTTTTGT

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MLAVLLSACNTLPKQPHLNQSIQLTQRLQANYNTHLQPALPSNATAAEIELDKKAQLSRAIDQQSEAHPHLSGYHTIITG
ANAFAARSILTDRASKSIDVQYYIWHNDQAGQLLLKKLWQAADRGVIVRFLLDDFNNNAALDKHLLRFASHPNIAVRLIN
PLTHRKFQTLNYLVSLKRINHRMHNKSMTFDRKLSIIGGRNVGNEYLSNDKNTQFADLDVLLIGNVVDDVTHSFDQYWDS
GLSYDIETLVKGKANKPINYDKQTSSEQFFNSLEKINPQNPQTAEEALNAYNRALANSTIDTDLINKRVPFRWAPMTFLS
DDVKKLVQKADPESHLVVQLRDLLGTPTKQLSIVSSYFVPTKDGVNTLIELAKQGVKVRILTNSFNATDVSAVHAGYAQW
RVALLRAGIEIYELKATASEEDRENKLWRARSQSSTSLHAKAFAVDDHNVFIGSYNVDPRSANINTEMGVVIEDDALAKK
LHAAISDQLLSQAYKVILTPTGQLQWQTLENTELVIYEQEPHIDLIDSLWINVMSSMPIDWLL

Sequences:

>Translated_543_residues
MLAVLLSACNTLPKQPHLNQSIQLTQRLQANYNTHLQPALPSNATAAEIELDKKAQLSRAIDQQSEAHPHLSGYHTIITG
ANAFAARSILTDRASKSIDVQYYIWHNDQAGQLLLKKLWQAADRGVIVRFLLDDFNNNAALDKHLLRFASHPNIAVRLIN
PLTHRKFQTLNYLVSLKRINHRMHNKSMTFDRKLSIIGGRNVGNEYLSNDKNTQFADLDVLLIGNVVDDVTHSFDQYWDS
GLSYDIETLVKGKANKPINYDKQTSSEQFFNSLEKINPQNPQTAEEALNAYNRALANSTIDTDLINKRVPFRWAPMTFLS
DDVKKLVQKADPESHLVVQLRDLLGTPTKQLSIVSSYFVPTKDGVNTLIELAKQGVKVRILTNSFNATDVSAVHAGYAQW
RVALLRAGIEIYELKATASEEDRENKLWRARSQSSTSLHAKAFAVDDHNVFIGSYNVDPRSANINTEMGVVIEDDALAKK
LHAAISDQLLSQAYKVILTPTGQLQWQTLENTELVIYEQEPHIDLIDSLWINVMSSMPIDWLL
>Mature_543_residues
MLAVLLSACNTLPKQPHLNQSIQLTQRLQANYNTHLQPALPSNATAAEIELDKKAQLSRAIDQQSEAHPHLSGYHTIITG
ANAFAARSILTDRASKSIDVQYYIWHNDQAGQLLLKKLWQAADRGVIVRFLLDDFNNNAALDKHLLRFASHPNIAVRLIN
PLTHRKFQTLNYLVSLKRINHRMHNKSMTFDRKLSIIGGRNVGNEYLSNDKNTQFADLDVLLIGNVVDDVTHSFDQYWDS
GLSYDIETLVKGKANKPINYDKQTSSEQFFNSLEKINPQNPQTAEEALNAYNRALANSTIDTDLINKRVPFRWAPMTFLS
DDVKKLVQKADPESHLVVQLRDLLGTPTKQLSIVSSYFVPTKDGVNTLIELAKQGVKVRILTNSFNATDVSAVHAGYAQW
RVALLRAGIEIYELKATASEEDRENKLWRARSQSSTSLHAKAFAVDDHNVFIGSYNVDPRSANINTEMGVVIEDDALAKK
LHAAISDQLLSQAYKVILTPTGQLQWQTLENTELVIYEQEPHIDLIDSLWINVMSSMPIDWLL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=492, Percent_Identity=38.2113821138211, Blast_Score=324, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61152; Mature: 61152

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVLLSACNTLPKQPHLNQSIQLTQRLQANYNTHLQPALPSNATAAEIELDKKAQLSRA
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
IDQQSEAHPHLSGYHTIITGANAFAARSILTDRASKSIDVQYYIWHNDQAGQLLLKKLWQ
HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHH
AADRGVIVRFLLDDFNNNAALDKHLLRFASHPNIAVRLINPLTHRKFQTLNYLVSLKRIN
HCCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
HRMHNKSMTFDRKLSIIGGRNVGNEYLSNDKNTQFADLDVLLIGNVVDDVTHSFDQYWDS
HHHHCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEECEEEEEECHHHHHHHHHHHHHHCC
GLSYDIETLVKGKANKPINYDKQTSSEQFFNSLEKINPQNPQTAEEALNAYNRALANSTI
CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
DTDLINKRVPFRWAPMTFLSDDVKKLVQKADPESHLVVQLRDLLGTPTKQLSIVSSYFVP
CHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
TKDGVNTLIELAKQGVKVRILTNSFNATDVSAVHAGYAQWRVALLRAGIEIYELKATASE
CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
EDRENKLWRARSQSSTSLHAKAFAVDDHNVFIGSYNVDPRSANINTEMGVVIEDDALAKK
CHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHH
LHAAISDQLLSQAYKVILTPTGQLQWQTLENTELVIYEQEPHIDLIDSLWINVMSSMPID
HHHHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCH
WLL
HCC
>Mature Secondary Structure
MLAVLLSACNTLPKQPHLNQSIQLTQRLQANYNTHLQPALPSNATAAEIELDKKAQLSRA
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
IDQQSEAHPHLSGYHTIITGANAFAARSILTDRASKSIDVQYYIWHNDQAGQLLLKKLWQ
HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHH
AADRGVIVRFLLDDFNNNAALDKHLLRFASHPNIAVRLINPLTHRKFQTLNYLVSLKRIN
HCCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
HRMHNKSMTFDRKLSIIGGRNVGNEYLSNDKNTQFADLDVLLIGNVVDDVTHSFDQYWDS
HHHHCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEECEEEEEECHHHHHHHHHHHHHHCC
GLSYDIETLVKGKANKPINYDKQTSSEQFFNSLEKINPQNPQTAEEALNAYNRALANSTI
CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
DTDLINKRVPFRWAPMTFLSDDVKKLVQKADPESHLVVQLRDLLGTPTKQLSIVSSYFVP
CHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
TKDGVNTLIELAKQGVKVRILTNSFNATDVSAVHAGYAQWRVALLRAGIEIYELKATASE
CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
EDRENKLWRARSQSSTSLHAKAFAVDDHNVFIGSYNVDPRSANINTEMGVVIEDDALAKK
CHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHH
LHAAISDQLLSQAYKVILTPTGQLQWQTLENTELVIYEQEPHIDLIDSLWINVMSSMPID
HHHHHHHHHHHHHHEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCH
WLL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]