Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652483
Identifier: 148652483
GI number: 148652483
Start: 817190
End: 817645
Strand: Direct
Name: 148652483
Synonym: PsycPRwf_0672
Alternate gene names: NA
Gene position: 817190-817645 (Clockwise)
Preceding gene: 148652482
Following gene: 148652484
Centisome position: 27.43
GC content: 44.3
Gene sequence:
>456_bases ATGAAACGTACGAATCAGCTTCAGCCTTTGTCACGAGAGCATCATTTAGGTCTGGTGCTCTCTCGCCGTGCTAAGGTATG TGCCAATGATGTTGAGGACATTGCCAAACACTGGACAGCTTTGACGGACTATATTAACCAAAATATGACCAACCACTTTA AGGTTGAAGATGATCTTATATTGGCCAAGCTAGAGGGTTATAGAGCCAGCCATCCTCAAGTGGCACAGGTCATTGATAAA ATAGCTGAGCAGCATCAAAAGCTGTATCAGCTTATTGGTTTGCCTAGCCTGAGTGCCGCTCAAGTTCAAGAGCTTGCCAA CGCTTTGTATGACCATATTCGTTTTGAGGAGCGTGAGCTGTTTCCACTGGCTCAACACGTGTTGTCCGAGCAAGAGCTGG ATGCTATTTATGATGCCAGCTCTAAAAATGTCAAACGTGAAAAAGAAAATCGATAA
Upstream 100 bases:
>100_bases GGAGCTGGCTCAAGAGAATATTTTCCGCGGTTAGATAGGCTAGGCTGTAAGGTCAAAGTCAAAGTCAAAGTGTAAGTTAC TAAGTGTATAAGGATGTATT
Downstream 100 bases:
>100_bases GCCATTACCTCGACAGGAAGTCATCACTTTTGTCTGTATGTACTATCGTAAGGAGATAACATGAGCCCTATAGTCATTCC CAGTCACTGGAGAGTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKRTNQLQPLSREHHLGLVLSRRAKVCANDVEDIAKHWTALTDYINQNMTNHFKVEDDLILAKLEGYRASHPQVAQVIDK IAEQHQKLYQLIGLPSLSAAQVQELANALYDHIRFEERELFPLAQHVLSEQELDAIYDASSKNVKREKENR
Sequences:
>Translated_151_residues MKRTNQLQPLSREHHLGLVLSRRAKVCANDVEDIAKHWTALTDYINQNMTNHFKVEDDLILAKLEGYRASHPQVAQVIDK IAEQHQKLYQLIGLPSLSAAQVQELANALYDHIRFEERELFPLAQHVLSEQELDAIYDASSKNVKREKENR >Mature_151_residues MKRTNQLQPLSREHHLGLVLSRRAKVCANDVEDIAKHWTALTDYINQNMTNHFKVEDDLILAKLEGYRASHPQVAQVIDK IAEQHQKLYQLIGLPSLSAAQVQELANALYDHIRFEERELFPLAQHVLSEQELDAIYDASSKNVKREKENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17451; Mature: 17451
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTNQLQPLSREHHLGLVLSRRAKVCANDVEDIAKHWTALTDYINQNMTNHFKVEDDLI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LAKLEGYRASHPQVAQVIDKIAEQHQKLYQLIGLPSLSAAQVQELANALYDHIRFEEREL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH FPLAQHVLSEQELDAIYDASSKNVKREKENR HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MKRTNQLQPLSREHHLGLVLSRRAKVCANDVEDIAKHWTALTDYINQNMTNHFKVEDDLI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LAKLEGYRASHPQVAQVIDKIAEQHQKLYQLIGLPSLSAAQVQELANALYDHIRFEEREL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH FPLAQHVLSEQELDAIYDASSKNVKREKENR HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA