Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is yeaR [H]
Identifier: 148652484
GI number: 148652484
Start: 817706
End: 818104
Strand: Direct
Name: yeaR [H]
Synonym: PsycPRwf_0673
Alternate gene names: 148652484
Gene position: 817706-818104 (Clockwise)
Preceding gene: 148652483
Following gene: 148652485
Centisome position: 27.45
GC content: 45.36
Gene sequence:
>399_bases ATGAGCCCTATAGTCATTCCCAGTCACTGGAGAGTCAAGCGCTCCACACCATTCTTCACCAAAGATAATATCCCTCCTGC ATTACTGACCCACCACAATACAGCTGCAGGTATTTATGGTCAGATTTGCGTCATGCAAGGCACGGTTACCTTTTTTGGCT TTGCTGATGAAGCTGCCACTGAGCCTGAGAAAAAAATTGTGATTCAGGCCGGCCAGTTTGCAGTCAGTCCACCACAGTAT TGGCACCGGGTTGAGCTAAGTGACGATGCTCAATTTAATATTAACTTTTGGTCCGAAAAAGAGCATGAAGGCAGCAAGCT TATGCAGCAGTCAAAAGTACACAATCAGCCCATCGCAGATTTATTCGATGAGGTTGTGAAGGATGCACCCAAAAAATAA
Upstream 100 bases:
>100_bases CAGCTCTAAAAATGTCAAACGTGAAAAAGAAAATCGATAAGCCATTACCTCGACAGGAAGTCATCACTTTTGTCTGTATG TACTATCGTAAGGAGATAAC
Downstream 100 bases:
>100_bases TACCAAATCTAAAAATTAACATAGCAAGGATGATGAGTGAAAAGATGACAAGTGAAAACTGTACACCTAGTACGGTAAAC GAGTTTGACAACGCTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSPIVIPSHWRVKRSTPFFTKDNIPPALLTHHNTAAGIYGQICVMQGTVTFFGFADEAATEPEKKIVIQAGQFAVSPPQY WHRVELSDDAQFNINFWSEKEHEGSKLMQQSKVHNQPIADLFDEVVKDAPKK
Sequences:
>Translated_132_residues MSPIVIPSHWRVKRSTPFFTKDNIPPALLTHHNTAAGIYGQICVMQGTVTFFGFADEAATEPEKKIVIQAGQFAVSPPQY WHRVELSDDAQFNINFWSEKEHEGSKLMQQSKVHNQPIADLFDEVVKDAPKK >Mature_131_residues SPIVIPSHWRVKRSTPFFTKDNIPPALLTHHNTAAGIYGQICVMQGTVTFFGFADEAATEPEKKIVIQAGQFAVSPPQYW HRVELSDDAQFNINFWSEKEHEGSKLMQQSKVHNQPIADLFDEVVKDAPKK
Specific function: Unknown
COG id: COG3615
COG function: function code P; Uncharacterized protein/domain, possibly involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788098, Length=114, Percent_Identity=40.3508771929825, Blast_Score=93, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015392 - InterPro: IPR014710 - InterPro: IPR014510 [H]
Pfam domain/function: PF09313 DUF1971 [H]
EC number: NA
Molecular weight: Translated: 14935; Mature: 14804
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIVIPSHWRVKRSTPFFTKDNIPPALLTHHNTAAGIYGQICVMQGTVTFFGFADEAAT CCCCCCCCCCEEECCCCCEECCCCCCCEEECCCCCCCHHEEEEEEECCEEEEEECCCCCC EPEKKIVIQAGQFAVSPPQYWHRVELSDDAQFNINFWSEKEHEGSKLMQQSKVHNQPIAD CCCCEEEEECCCEEECCHHHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHH LFDEVVKDAPKK HHHHHHHHCCCC >Mature Secondary Structure SPIVIPSHWRVKRSTPFFTKDNIPPALLTHHNTAAGIYGQICVMQGTVTFFGFADEAAT CCCCCCCCCEEECCCCCEECCCCCCCEEECCCCCCCHHEEEEEEECCEEEEEECCCCCC EPEKKIVIQAGQFAVSPPQYWHRVELSDDAQFNINFWSEKEHEGSKLMQQSKVHNQPIAD CCCCEEEEECCCEEECCHHHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHH LFDEVVKDAPKK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]