Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is surA [H]
Identifier: 148652482
GI number: 148652482
Start: 816170
End: 817123
Strand: Direct
Name: surA [H]
Synonym: PsycPRwf_0671
Alternate gene names: 148652482
Gene position: 816170-817123 (Clockwise)
Preceding gene: 148652481
Following gene: 148652483
Centisome position: 27.4
GC content: 46.86
Gene sequence:
>954_bases ATGACAGCAATGACTTACGACCCTAGACAAGCGGCGGATGACAATATTCGCATCATGCCCACCTCAGATGACTTAAAAAA GCCGCACTCTGACCAAGAGTTTATCCAAAAAGCACTGGCAGAGGAGCGTAGCAATCATCAAAATCTGATTGCCTCAAGTC GTGAAGAATTGCCAACAGTGCGTGTTAATGGTGTGGTAATTGACAAACAAGCCATCGCTCAAGAGCTACAGTATCATCCG GCACCCACCAAAGAGGATGCACTATTTTTGGCCACTCAAGCTTTGGTGGTGCGTGAGCTGTTAAAAAATGCAGTGCTTGA TGATGATACCTTGGGTCAAGCCGCTTGGGAGGCTAATGAAGAGCAGGCCATCTCAGATTTAATTGAAAAAAACGTAACAG CCAGCACGCCTGATGGTGACACGTGCGAGCGCTATTACGAACAAAATAAAGCCGATTATAAAACCGCGCCCATTATGTCA GTACGTCATATCTTACTGGCGAGCTTACCTGAGGATGGGGAAGAGCGTTTGGCGCTTAAAAAACAAGCATATGAGCTTAT TGAGCAGATTAATAACAGTACCAATGCTGATGCAGAGTTTATTGAGCTGGCGCGTCAGTATTCAGCTTGCCCCTCAAAAG AGCAAGGCGGTGAGCTGGGCGTGTTAACCCAAGGTCAAACTGTACCTGAGTTTGAATCGGTCGTCTTCTCAATGGATGAG GGGTTAGCGCCCAGTCCGGTCGAGACCCGCTATGGATTTCATATCGTACAGGTGCTTGATAAACAGCCTGGTGTTCAGCT GGATTACTTGCAAGCCAAACCTGCTATCGCGAATAAGCTTGCACAGCAGGCTTTCCATCATGGGCTATGTGATTACTTAT ATACCTTGGCTGAGCAAGCAGAGATTGATGGTATTCAAATGGAGCTGGCTCAAGAGAATATTTTCCGCGGTTAG
Upstream 100 bases:
>100_bases ATTAAATCACGCTGTTCATCTGTAGCAGCAGCTCTATAAAGCTTGCCGATATTAAGATTAAGGCAGCTTTATAGAGACAT ATGACTCAATGGAGTACACC
Downstream 100 bases:
>100_bases ATAGGCTAGGCTGTAAGGTCAAAGTCAAAGTCAAAGTGTAAGTTACTAAGTGTATAAGGATGTATTATGAAACGTACGAA TCAGCTTCAGCCTTTGTCAC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTAMTYDPRQAADDNIRIMPTSDDLKKPHSDQEFIQKALAEERSNHQNLIASSREELPTVRVNGVVIDKQAIAQELQYHP APTKEDALFLATQALVVRELLKNAVLDDDTLGQAAWEANEEQAISDLIEKNVTASTPDGDTCERYYEQNKADYKTAPIMS VRHILLASLPEDGEERLALKKQAYELIEQINNSTNADAEFIELARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDE GLAPSPVETRYGFHIVQVLDKQPGVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQAEIDGIQMELAQENIFRG
Sequences:
>Translated_317_residues MTAMTYDPRQAADDNIRIMPTSDDLKKPHSDQEFIQKALAEERSNHQNLIASSREELPTVRVNGVVIDKQAIAQELQYHP APTKEDALFLATQALVVRELLKNAVLDDDTLGQAAWEANEEQAISDLIEKNVTASTPDGDTCERYYEQNKADYKTAPIMS VRHILLASLPEDGEERLALKKQAYELIEQINNSTNADAEFIELARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDE GLAPSPVETRYGFHIVQVLDKQPGVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQAEIDGIQMELAQENIFRG >Mature_316_residues TAMTYDPRQAADDNIRIMPTSDDLKKPHSDQEFIQKALAEERSNHQNLIASSREELPTVRVNGVVIDKQAIAQELQYHPA PTKEDALFLATQALVVRELLKNAVLDDDTLGQAAWEANEEQAISDLIEKNVTASTPDGDTCERYYEQNKADYKTAPIMSV RHILLASLPEDGEERLALKKQAYELIEQINNSTNADAEFIELARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDEG LAPSPVETRYGFHIVQVLDKQPGVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQAEIDGIQMELAQENIFRG
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1790211, Length=86, Percent_Identity=45.3488372093023, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 35348; Mature: 35217
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMTYDPRQAADDNIRIMPTSDDLKKPHSDQEFIQKALAEERSNHQNLIASSREELPTV CCCCCCCCHHCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE RVNGVVIDKQAIAQELQYHPAPTKEDALFLATQALVVRELLKNAVLDDDTLGQAAWEANE EECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH EQAISDLIEKNVTASTPDGDTCERYYEQNKADYKTAPIMSVRHILLASLPEDGEERLALK HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH KQAYELIEQINNSTNADAEFIELARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDE HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCC GLAPSPVETRYGFHIVQVLDKQPGVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQA CCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EIDGIQMELAQENIFRG HCCCHHHHHHHHHHCCC >Mature Secondary Structure TAMTYDPRQAADDNIRIMPTSDDLKKPHSDQEFIQKALAEERSNHQNLIASSREELPTV CCCCCCCHHCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE RVNGVVIDKQAIAQELQYHPAPTKEDALFLATQALVVRELLKNAVLDDDTLGQAAWEANE EECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH EQAISDLIEKNVTASTPDGDTCERYYEQNKADYKTAPIMSVRHILLASLPEDGEERLALK HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH KQAYELIEQINNSTNADAEFIELARQYSACPSKEQGGELGVLTQGQTVPEFESVVFSMDE HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCC GLAPSPVETRYGFHIVQVLDKQPGVQLDYLQAKPAIANKLAQQAFHHGLCDYLYTLAEQA CCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EIDGIQMELAQENIFRG HCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA