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The map label for this gene is fdhD [H]

Identifier: 148652147

GI number: 148652147

Start: 404540

End: 405679

Strand: Direct

Name: fdhD [H]

Synonym: PsycPRwf_0335

Alternate gene names: 148652147

Gene position: 404540-405679 (Clockwise)

Preceding gene: 148652146

Following gene: 148652148

Centisome position: 13.58

GC content: 51.67

Gene sequence:

>1140_bases
ATGGACAATACAGCAGCACATTTTGACTCACAGATAGGCGTGCCGGTGGAGTTACAACGCCGGCTGACTCGAGAGCACAG
TGCGCAAATGCACCGTTTTACGCGCAGTGATGAGGCGTCTATAGGTGGTGGCAGCTGTGTTAGCAGTCGTACCCCCACTA
AAGATGCTCAGCCATTACAGATTGAGACCCATCTGGCTACGTTAGCAGTAGAGGCGGCAGTGGCTTTGGTCATCAATGGC
ATTCATTATGCGGTGCTGATGGCTAGCCCCGCTCAGCTTGAGCATCTGGCACTGGGGTTTTTGTACAGTGAAGGCTTGAT
ACAGCACAGTGGTGAGCTGCTCGACTGGGAGATTACCGCCATTAATAGTGTTGAGGATTTACAGGCTTTCGCACCCGCGA
ATGAGTCACGTCTTATTGAGTCACAAGCTGCAGTAAACTGGGCGCATCTGCTCAGTGATTATGAAGCGTACGTCGTCACC
TTAGTGCTCAATCAGCGCTGCCATCAGCGTATTTTAGCGCAGCGCCGGCAACTGGCTGGGCGTACAGGCTGCGGAATGTG
CGGAATGACCGGATTGCAGCAGGCTTTGCCGGATCTAAGCGCCTATAGTCGTTATGCTACAAGCGATGAAGCATCAAGCT
CCCCCAGCTATCCAGTACAGCCTGTCAGCGTAAAGCAAGCGGCGTATGGTCGTGGTGATAACGCTATTAATGGCCGTGCT
GATAATGGCTCGCCTAATAGCAGTGCCGACAAGCAGACACGTCCAAACCTAGAGCAGTTATTACAAATTAGAGCACTAAT
TGAGTCGACCCAAGCCACGCATCAGCTAACGGGCGCAGTACATGCAGCAGCAACTTGGTATCAAGGAGAGCTGTACGTGT
TTGAAGATGTCGGTCGACACAATGCACTGGATAAGCTTATTGGGTGGCAGCTGCGCAATCAAGTGGCGTTAGAGTTTGTG
GTCATGACCTCAAGACTGTCTATTGAGCTGGTTCAAAAAGCAGTGCGTTGTCGTCTGCCTTGGCTGGTTGGTATGTCAGC
ACCAACCAGTACTGCGGTACGGGTGGCACAGCGTTATGGGCTGGGCTTAGCCGGGTTTTTGCGAGATAATAGAGTGACTT
ATTATGGTGATAATGTGTAG

Upstream 100 bases:

>100_bases
TTAAAAAAGGTAGACTTAGATGAACAACAACAAGCGATATCCGAGCCCAGCACTACAGCGACCGCTTAATGATGACCGAT
TTAACACTAATTAAGGCGAT

Downstream 100 bases:

>100_bases
GCGTGCTTTTTAAGCCGTTATTTTAATACGTTACTGTTTGCAGATTAGTTTTTTGTAGAGCAGCGCTTGCACTGCAATGG
TTGACAGACTGGCTAAGAGG

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MDNTAAHFDSQIGVPVELQRRLTREHSAQMHRFTRSDEASIGGGSCVSSRTPTKDAQPLQIETHLATLAVEAAVALVING
IHYAVLMASPAQLEHLALGFLYSEGLIQHSGELLDWEITAINSVEDLQAFAPANESRLIESQAAVNWAHLLSDYEAYVVT
LVLNQRCHQRILAQRRQLAGRTGCGMCGMTGLQQALPDLSAYSRYATSDEASSSPSYPVQPVSVKQAAYGRGDNAINGRA
DNGSPNSSADKQTRPNLEQLLQIRALIESTQATHQLTGAVHAAATWYQGELYVFEDVGRHNALDKLIGWQLRNQVALEFV
VMTSRLSIELVQKAVRCRLPWLVGMSAPTSTAVRVAQRYGLGLAGFLRDNRVTYYGDNV

Sequences:

>Translated_379_residues
MDNTAAHFDSQIGVPVELQRRLTREHSAQMHRFTRSDEASIGGGSCVSSRTPTKDAQPLQIETHLATLAVEAAVALVING
IHYAVLMASPAQLEHLALGFLYSEGLIQHSGELLDWEITAINSVEDLQAFAPANESRLIESQAAVNWAHLLSDYEAYVVT
LVLNQRCHQRILAQRRQLAGRTGCGMCGMTGLQQALPDLSAYSRYATSDEASSSPSYPVQPVSVKQAAYGRGDNAINGRA
DNGSPNSSADKQTRPNLEQLLQIRALIESTQATHQLTGAVHAAATWYQGELYVFEDVGRHNALDKLIGWQLRNQVALEFV
VMTSRLSIELVQKAVRCRLPWLVGMSAPTSTAVRVAQRYGLGLAGFLRDNRVTYYGDNV
>Mature_379_residues
MDNTAAHFDSQIGVPVELQRRLTREHSAQMHRFTRSDEASIGGGSCVSSRTPTKDAQPLQIETHLATLAVEAAVALVING
IHYAVLMASPAQLEHLALGFLYSEGLIQHSGELLDWEITAINSVEDLQAFAPANESRLIESQAAVNWAHLLSDYEAYVVT
LVLNQRCHQRILAQRRQLAGRTGCGMCGMTGLQQALPDLSAYSRYATSDEASSSPSYPVQPVSVKQAAYGRGDNAINGRA
DNGSPNSSADKQTRPNLEQLLQIRALIESTQATHQLTGAVHAAATWYQGELYVFEDVGRHNALDKLIGWQLRNQVALEFV
VMTSRLSIELVQKAVRCRLPWLVGMSAPTSTAVRVAQRYGLGLAGFLRDNRVTYYGDNV

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=319, Percent_Identity=32.2884012539185, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 41454; Mature: 41454

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTAAHFDSQIGVPVELQRRLTREHSAQMHRFTRSDEASIGGGSCVSSRTPTKDAQPLQ
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
IETHLATLAVEAAVALVINGIHYAVLMASPAQLEHLALGFLYSEGLIQHSGELLDWEITA
EHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
INSVEDLQAFAPANESRLIESQAAVNWAHLLSDYEAYVVTLVLNQRCHQRILAQRRQLAG
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RTGCGMCGMTGLQQALPDLSAYSRYATSDEASSSPSYPVQPVSVKQAAYGRGDNAINGRA
CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
DNGSPNSSADKQTRPNLEQLLQIRALIESTQATHQLTGAVHAAATWYQGELYVFEDVGRH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCH
NALDKLIGWQLRNQVALEFVVMTSRLSIELVQKAVRCRLPWLVGMSAPTSTAVRVAQRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHC
LGLAGFLRDNRVTYYGDNV
CCHHHHHCCCEEEEECCCC
>Mature Secondary Structure
MDNTAAHFDSQIGVPVELQRRLTREHSAQMHRFTRSDEASIGGGSCVSSRTPTKDAQPLQ
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
IETHLATLAVEAAVALVINGIHYAVLMASPAQLEHLALGFLYSEGLIQHSGELLDWEITA
EHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
INSVEDLQAFAPANESRLIESQAAVNWAHLLSDYEAYVVTLVLNQRCHQRILAQRRQLAG
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RTGCGMCGMTGLQQALPDLSAYSRYATSDEASSSPSYPVQPVSVKQAAYGRGDNAINGRA
CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
DNGSPNSSADKQTRPNLEQLLQIRALIESTQATHQLTGAVHAAATWYQGELYVFEDVGRH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCH
NALDKLIGWQLRNQVALEFVVMTSRLSIELVQKAVRCRLPWLVGMSAPTSTAVRVAQRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHC
LGLAGFLRDNRVTYYGDNV
CCHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA