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The map label for this gene is torD [H]

Identifier: 148652031

GI number: 148652031

Start: 255591

End: 256256

Strand: Direct

Name: torD [H]

Synonym: PsycPRwf_0215

Alternate gene names: 148652031

Gene position: 255591-256256 (Clockwise)

Preceding gene: 148652030

Following gene: 148652032

Centisome position: 8.58

GC content: 49.55

Gene sequence:

>666_bases
ATGAATAATAGTCAACAATGGCAGGCAGCCAATACTGCCCGTGCTGCGCTTTATCGCTGGTTTGCCGAGCTGTTCGCCCG
TGAGTTAACTAAGACCAACTTAACGCAGCTGCAAGCCCAATACCCAAGCCTGCATGCCGCTTTTAGTGATCTTAATCTTG
AGCCGCAAAGCGCGGCGCTACAAACAGCACTGGAGAACCTGCAAGTTATCCCAGCGCCAGATAGAGCATTAGAGCTCGCT
GCAGACTTTGCCCACCTGTTTTTGTTAAGTGGTCATCAAAGTGCGCCGCCGTACGCCTCTTATTATCTTGAGTCCGATCA
GATGCTTTATGGCAAGCCGGCGCAGCAAATGAGTGAGTTTTTGGCCAGTCATAAGCTTGACTTACACCCTGAGTTTCGTG
AGCCCAAAGATCATTTAAGTATTTATTTGCAAGTGATGAGCCTGTGGATTAAAAGCAGCGTCGATGAGCAGGCGAACCTT
ATCGAGATGGCGGTACAGCAACAGCATTTTTTAGAGGATGCGTTGCTCAGCTGGCTGCCTAAGTTTGCGGCGCGTTGCCA
ACATATTCGGGTAAAAACCCAAGTGTATCCCGCCATCATTGACTTGCTGCTGCATTTTGTACAAGAAGACAGACAAGCCT
TGGAAGACATGGCCGAGGCCGAGTAG

Upstream 100 bases:

>100_bases
TGCTTACAAGGGCTTTGCTTAAGCGCTAAGCAGGGCCCTTACTTTGTGGTTATGCCGCTTGTTGCGACCACCCATAACTC
TTTAGTGTAATGGAATTAAA

Downstream 100 bases:

>100_bases
AATGGGGTATGATGTTAGGACTTATCAAGCCTGTGAATAACCCGATTAATCAAAGAGAGCGTATTTATGATCACTGTTGC
TGAGCTACAAGCTGCCATTA

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNNSQQWQAANTARAALYRWFAELFARELTKTNLTQLQAQYPSLHAAFSDLNLEPQSAALQTALENLQVIPAPDRALELA
ADFAHLFLLSGHQSAPPYASYYLESDQMLYGKPAQQMSEFLASHKLDLHPEFREPKDHLSIYLQVMSLWIKSSVDEQANL
IEMAVQQQHFLEDALLSWLPKFAARCQHIRVKTQVYPAIIDLLLHFVQEDRQALEDMAEAE

Sequences:

>Translated_221_residues
MNNSQQWQAANTARAALYRWFAELFARELTKTNLTQLQAQYPSLHAAFSDLNLEPQSAALQTALENLQVIPAPDRALELA
ADFAHLFLLSGHQSAPPYASYYLESDQMLYGKPAQQMSEFLASHKLDLHPEFREPKDHLSIYLQVMSLWIKSSVDEQANL
IEMAVQQQHFLEDALLSWLPKFAARCQHIRVKTQVYPAIIDLLLHFVQEDRQALEDMAEAE
>Mature_221_residues
MNNSQQWQAANTARAALYRWFAELFARELTKTNLTQLQAQYPSLHAAFSDLNLEPQSAALQTALENLQVIPAPDRALELA
ADFAHLFLLSGHQSAPPYASYYLESDQMLYGKPAQQMSEFLASHKLDLHPEFREPKDHLSIYLQVMSLWIKSSVDEQANL
IEMAVQQQHFLEDALLSWLPKFAARCQHIRVKTQVYPAIIDLLLHFVQEDRQALEDMAEAE

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=203, Percent_Identity=36.4532019704434, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25280; Mature: 25280

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSQQWQAANTARAALYRWFAELFARELTKTNLTQLQAQYPSLHAAFSDLNLEPQSAAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH
QTALENLQVIPAPDRALELAADFAHLFLLSGHQSAPPYASYYLESDQMLYGKPAQQMSEF
HHHHHHCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCHHHHHHH
LASHKLDLHPEFREPKDHLSIYLQVMSLWIKSSVDEQANLIEMAVQQQHFLEDALLSWLP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFAARCQHIRVKTQVYPAIIDLLLHFVQEDRQALEDMAEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNSQQWQAANTARAALYRWFAELFARELTKTNLTQLQAQYPSLHAAFSDLNLEPQSAAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHH
QTALENLQVIPAPDRALELAADFAHLFLLSGHQSAPPYASYYLESDQMLYGKPAQQMSEF
HHHHHHCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCHHHHHHH
LASHKLDLHPEFREPKDHLSIYLQVMSLWIKSSVDEQANLIEMAVQQQHFLEDALLSWLP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFAARCQHIRVKTQVYPAIIDLLLHFVQEDRQALEDMAEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA