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The map label for this gene is atpH

Identifier: 148652006

GI number: 148652006

Start: 225257

End: 225886

Strand: Direct

Name: atpH

Synonym: PsycPRwf_0190

Alternate gene names: 148652006

Gene position: 225257-225886 (Clockwise)

Preceding gene: 148652005

Following gene: 148652007

Centisome position: 7.56

GC content: 43.17

Gene sequence:

>630_bases
ATGGCTGAATTATCTACACTAGCGAGACCCTACGCCAAAGCAGCATTTGACTATGCCCATGAAAACTCAGTCATTGGTGA
GTGGGAAGATTTCTTGTTTATCGCAAGCAGCGTGGTTGGTGATTCTGCCTTTGTGCAAATGCTAGAAAACCCCGCTATTA
CTGCTGAGCAAAAAGCTGACATGTTAGTTAGCATCTATGACGAGCAAGTAACCTCAACTGAGGAGACACCGCTTAAGTCT
TTGCTTCTTAGCACTCAAAGTCATACAGATGAGGCGCAGTCTAATCAAGCTCTTCCGGCCGCAACCCCTCAAATCAAAAA
CTTTGTGCACCAATTGGCCGAGCAAGAACGTTTGAGCTTAATACCTCAGGTATATGAGCAATTTCGCTTGCATCGTGCTC
AAGCACTCAAACAAGTCAACGCATATGTGACGTCTGCTTATCCGCTAAGTGAGACACAGCGTGTCATGATTCAAAAGCGC
TTAGAAGAATCTTTAAAAGCATCTGTTATTATTCATGAAGATGTAGATCCTAGTTTATTAGCGGGTGCCACTGTTAAAAT
TGGCGACAAGCTTGTTGATGACTCGGTGCGTGGAAAATTAAAACAGTTAAAAACACAGCTAACTGCTTAA

Upstream 100 bases:

>100_bases
CCTTAGTCCACAGTAGGGGTTAACTCTTATCAATAATCAATTTCTCATACCTGGTTTGTTTTATATAAAGTTTTACATAA
AATATGGCTAAGAGGACATA

Downstream 100 bases:

>100_bases
CGCATAATTAAAAATAATAATAGTGGCCCAACACGGCTTACTGTACTACATACAGGCTATTATTAAAGTACTTATAACAG
TAACTTTTGCCTAATAATAA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAELSTLARPYAKAAFDYAHENSVIGEWEDFLFIASSVVGDSAFVQMLENPAITAEQKADMLVSIYDEQVTSTEETPLKS
LLLSTQSHTDEAQSNQALPAATPQIKNFVHQLAEQERLSLIPQVYEQFRLHRAQALKQVNAYVTSAYPLSETQRVMIQKR
LEESLKASVIIHEDVDPSLLAGATVKIGDKLVDDSVRGKLKQLKTQLTA

Sequences:

>Translated_209_residues
MAELSTLARPYAKAAFDYAHENSVIGEWEDFLFIASSVVGDSAFVQMLENPAITAEQKADMLVSIYDEQVTSTEETPLKS
LLLSTQSHTDEAQSNQALPAATPQIKNFVHQLAEQERLSLIPQVYEQFRLHRAQALKQVNAYVTSAYPLSETQRVMIQKR
LEESLKASVIIHEDVDPSLLAGATVKIGDKLVDDSVRGKLKQLKTQLTA
>Mature_208_residues
AELSTLARPYAKAAFDYAHENSVIGEWEDFLFIASSVVGDSAFVQMLENPAITAEQKADMLVSIYDEQVTSTEETPLKSL
LLSTQSHTDEAQSNQALPAATPQIKNFVHQLAEQERLSLIPQVYEQFRLHRAQALKQVNAYVTSAYPLSETQRVMIQKRL
EESLKASVIIHEDVDPSLLAGATVKIGDKLVDDSVRGKLKQLKTQLTA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=203, Percent_Identity=30.5418719211823, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PSYWF (A5WBV8)

Other databases:

- EMBL:   CP000713
- RefSeq:   YP_001279099.1
- STRING:   A5WBV8
- GeneID:   5204541
- GenomeReviews:   CP000713_GR
- KEGG:   prw:PsycPRwf_0190
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- ProtClustDB:   PRK05758
- BioCyc:   PSP56811:PSYCPRWF_0190-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 23202; Mature: 23070

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELSTLARPYAKAAFDYAHENSVIGEWEDFLFIASSVVGDSAFVQMLENPAITAEQKAD
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHH
MLVSIYDEQVTSTEETPLKSLLLSTQSHTDEAQSNQALPAATPQIKNFVHQLAEQERLSL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IPQVYEQFRLHRAQALKQVNAYVTSAYPLSETQRVMIQKRLEESLKASVIIHEDVDPSLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
AGATVKIGDKLVDDSVRGKLKQLKTQLTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELSTLARPYAKAAFDYAHENSVIGEWEDFLFIASSVVGDSAFVQMLENPAITAEQKAD
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHH
MLVSIYDEQVTSTEETPLKSLLLSTQSHTDEAQSNQALPAATPQIKNFVHQLAEQERLSL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IPQVYEQFRLHRAQALKQVNAYVTSAYPLSETQRVMIQKRLEESLKASVIIHEDVDPSLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH
AGATVKIGDKLVDDSVRGKLKQLKTQLTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA