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The map label for this gene is yhbO [C]

Identifier: 148651976

GI number: 148651976

Start: 191213

End: 191740

Strand: Direct

Name: yhbO [C]

Synonym: PsycPRwf_0160

Alternate gene names: 148651976

Gene position: 191213-191740 (Clockwise)

Preceding gene: 148651975

Following gene: 148651977

Centisome position: 6.42

GC content: 42.61

Gene sequence:

>528_bases
ATGAGTAAGCGTATCGCTTTTTTATTAAACTCTCATTTTGAGCAAGCCGAATATGCTGACGTAGACCGCTTGTTACAGGA
CAAAGGTTATGAGACCGTACTGATTACCACCAATGATAATAAAACGGTTCAGGCCATGCAGCAGGATGTGGACAAAGCAG
ATACCTTTACTGCTGACTTATTTTTAAGTGAGGCCAGCGCTGAGGATTATGACGCGGTGGTTTTACCAGGTGGAACCGTT
AATGCAGATACCATTCGTATCGACAAGAGTGCCCAAAATTTTGTTAAACAGTTTTACGACGCCAACAAGCCTGTAGCGGC
TATCTGTCATGCACCTTGGCTGTTAGTGAATAGCGGTTTGGTAAAAGGTAAAACAGTAACCGCTTATCCGTCACTACAAA
CTGATATAGAAAATGCAGGCGGCACTTTCGTGGATAAATCTGTACAGCAAGATGGCAATATTATTACGTCACGTAAGCCA
GATGATATCGAAGACTTCGTAGCAGCTATTGATAAGGCACTGTCTTAA

Upstream 100 bases:

>100_bases
AAATTACCTGTGACTAAATGACCAATTATCAACGGATAGATTGCAACCTATAAATTAACCAATAAAGATAATTGACTAAC
AAATAACGGAGATCTAAATC

Downstream 100 bases:

>100_bases
CTTTAATAGTTGGTTAATTTATCAATCCCTCTAACCCATACTCAATTTTTCTAACCCATACATTGAGAAAAATCATCATA
TAAGGAATATATTATGACAC

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSKRIAFLLNSHFEQAEYADVDRLLQDKGYETVLITTNDNKTVQAMQQDVDKADTFTADLFLSEASAEDYDAVVLPGGTV
NADTIRIDKSAQNFVKQFYDANKPVAAICHAPWLLVNSGLVKGKTVTAYPSLQTDIENAGGTFVDKSVQQDGNIITSRKP
DDIEDFVAAIDKALS

Sequences:

>Translated_175_residues
MSKRIAFLLNSHFEQAEYADVDRLLQDKGYETVLITTNDNKTVQAMQQDVDKADTFTADLFLSEASAEDYDAVVLPGGTV
NADTIRIDKSAQNFVKQFYDANKPVAAICHAPWLLVNSGLVKGKTVTAYPSLQTDIENAGGTFVDKSVQQDGNIITSRKP
DDIEDFVAAIDKALS
>Mature_174_residues
SKRIAFLLNSHFEQAEYADVDRLLQDKGYETVLITTNDNKTVQAMQQDVDKADTFTADLFLSEASAEDYDAVVLPGGTVN
ADTIRIDKSAQNFVKQFYDANKPVAAICHAPWLLVNSGLVKGKTVTAYPSLQTDIENAGGTFVDKSVQQDGNIITSRKPD
DIEDFVAAIDKALS

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=167, Percent_Identity=34.1317365269461, Blast_Score=107, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17531319, Length=119, Percent_Identity=31.0924369747899, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571932, Length=175, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24653499, Length=126, Percent_Identity=34.1269841269841, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19152; Mature: 19021

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRIAFLLNSHFEQAEYADVDRLLQDKGYETVLITTNDNKTVQAMQQDVDKADTFTADL
CCCCEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
FLSEASAEDYDAVVLPGGTVNADTIRIDKSAQNFVKQFYDANKPVAAICHAPWLLVNSGL
EEECCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHCCCCCEEEHHCCCEEEECCCC
VKGKTVTAYPSLQTDIENAGGTFVDKSVQQDGNIITSRKPDDIEDFVAAIDKALS
CCCCEEEECCCHHHHHHHCCCCEECHHHHCCCCEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SKRIAFLLNSHFEQAEYADVDRLLQDKGYETVLITTNDNKTVQAMQQDVDKADTFTADL
CCCEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
FLSEASAEDYDAVVLPGGTVNADTIRIDKSAQNFVKQFYDANKPVAAICHAPWLLVNSGL
EEECCCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHCCCCCEEEHHCCCEEEECCCC
VKGKTVTAYPSLQTDIENAGGTFVDKSVQQDGNIITSRKPDDIEDFVAAIDKALS
CCCCEEEECCCHHHHHHHCCCCEECHHHHCCCCEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]