Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is qor [C]
Identifier: 148651922
GI number: 148651922
Start: 125180
End: 126169
Strand: Direct
Name: qor [C]
Synonym: PsycPRwf_0105
Alternate gene names: 148651922
Gene position: 125180-126169 (Clockwise)
Preceding gene: 148651921
Following gene: 148651926
Centisome position: 4.2
GC content: 47.58
Gene sequence:
>990_bases ATGTCTTCAACGTATCCACAGACACAATCGGCCATCATCATCACAGAATTTGGTGAGGCAGATGTTTTGCAATATCGCTC AGATATGGTGGTGCCTACTCTTGATACAGGTATGGTCTTAGTCAAGATTGCATACGCCGGCATTAACCCAGTCGATTATA AAACCCGTCAAGGTTTGGGCTGGGGCGCACAAAATATCAAAGACAATCAGTTTGCTGCCAATCAGCCTGCAATATTGGGC TTTGATATGGCAGGCGAGGTGGTCGACAGTACCGTAGCGGACTTTAAGCCAGGAGATAAGGTGGCTGCCTTAAATTTCCA AGGCGGCTGCTATGCTCAATATAATACTGTGGACGCTCAAGTGTTGACAAAAGTGCCTGAAGCAGTCGATCTAAAGACAG CCGGTGCGCTGCCTTGCGTCGGTACCACTGCCAAGCAAATGATTGATTTTGCTGATATTAAACCAGGTGAGCATGTGGTT ATGAGTGCACCTGCCGGCGGGGTGGGCCATCTCACCTTACAAATGCTGGTGAATGCCATCGAGGAAAAAGGCATTAAGAT TACCCTTATTTGCTCGGCTGAGAAATATCAAAAAATCGGTAGTTTCATTGACCCAAGCAAACTTGAAGGCTGGATCGACT ACACCAAACAAGAGGCTTTTCCAGAGCTTGAGGCCGATTTATTATTAGACTTGGTGGGCGGTGAAGCGGGTAAAAAAGCA TTAGCCGTGGTCAAGACCGGTGGCCGTGTGGTGGTATTGCCTTCGATTTGGGCCGATGAGCTAAAAAAAGCGGGGGCGGA TAAACAGCTACAAGTAGAAGGCTTTATTGCTAAGCCCAATGCTCAAGACTTGGCCGCAGTCTTAAATCAGATTGCCCAAG GTAAGCTTGTGCTTCAGATCCAAGATACTTATCCATTGGCAAAAACTGCCGACGCACATCAGGCGCTAGAGACAGTGGAC AGCTTTGGTAAGATTGTGCTGGAGATGTAG
Upstream 100 bases:
>100_bases ATGGCATCGATATACAGAGTTAGGCTAGAGTTCTTAGCGTAACGGTATTATGCTGTAGGACTACCACTCACTAAAGCAAT AACAATACAAGGAGTATGTC
Downstream 100 bases:
>100_bases GGCTTTATTTAAGTGTGATGCAAGCCAATTGTCTAAGACACAGCAGATTACCGTATTAAGATTACAGCTCTAAGATTACC GTATTAATGCATTAAGGATG
Product: alcohol dehydrogenase
Products: NADP(+); Semiquinone. [C]
Alternate protein names: Oxidoreductase; Quinone Oxidoreductase; NADPHQuinone Reductase; Dehydrogenase; Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase GroES Domain-Containing Protein; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; NAD(P)H Quinone Oxidoreductase PIG3 Family; Alcohol Dehydrogenase Zinc-Containing; Alcohol Dehydrogenase Zinc-Dependent; Zinc-Containing Alcohol Dehydrogenase; Quinone Reductase; Zn-Dependent Oxidoreductase NADphQuinone Reductase; NADPH-Quinone Reductase; NADPHQuinone Reductase Related Zn-Dependent Oxidoreductase; Alcohol Dehydrogenase GroES-Like Protein; Zn-Dependent Oxidoreductase NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent Oxidoreductase; NADPHQuinone Oxidoreductase; NADPH-Quinone Oxidoreductase Zn Containing; Zinc-Dependent Oxidoreductase; PIG3 Family NAD(P)H Quinone Oxidoreductase; Quinone Oxidoreductase-Like Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSSTYPQTQSAIIITEFGEADVLQYRSDMVVPTLDTGMVLVKIAYAGINPVDYKTRQGLGWGAQNIKDNQFAANQPAILG FDMAGEVVDSTVADFKPGDKVAALNFQGGCYAQYNTVDAQVLTKVPEAVDLKTAGALPCVGTTAKQMIDFADIKPGEHVV MSAPAGGVGHLTLQMLVNAIEEKGIKITLICSAEKYQKIGSFIDPSKLEGWIDYTKQEAFPELEADLLLDLVGGEAGKKA LAVVKTGGRVVVLPSIWADELKKAGADKQLQVEGFIAKPNAQDLAAVLNQIAQGKLVLQIQDTYPLAKTADAHQALETVD SFGKIVLEM
Sequences:
>Translated_329_residues MSSTYPQTQSAIIITEFGEADVLQYRSDMVVPTLDTGMVLVKIAYAGINPVDYKTRQGLGWGAQNIKDNQFAANQPAILG FDMAGEVVDSTVADFKPGDKVAALNFQGGCYAQYNTVDAQVLTKVPEAVDLKTAGALPCVGTTAKQMIDFADIKPGEHVV MSAPAGGVGHLTLQMLVNAIEEKGIKITLICSAEKYQKIGSFIDPSKLEGWIDYTKQEAFPELEADLLLDLVGGEAGKKA LAVVKTGGRVVVLPSIWADELKKAGADKQLQVEGFIAKPNAQDLAAVLNQIAQGKLVLQIQDTYPLAKTADAHQALETVD SFGKIVLEM >Mature_328_residues SSTYPQTQSAIIITEFGEADVLQYRSDMVVPTLDTGMVLVKIAYAGINPVDYKTRQGLGWGAQNIKDNQFAANQPAILGF DMAGEVVDSTVADFKPGDKVAALNFQGGCYAQYNTVDAQVLTKVPEAVDLKTAGALPCVGTTAKQMIDFADIKPGEHVVM SAPAGGVGHLTLQMLVNAIEEKGIKITLICSAEKYQKIGSFIDPSKLEGWIDYTKQEAFPELEADLLLDLVGGEAGKKAL AVVKTGGRVVVLPSIWADELKKAGADKQLQVEGFIAKPNAQDLAAVLNQIAQGKLVLQIQDTYPLAKTADAHQALETVDS FGKIVLEM
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194239674, Length=332, Percent_Identity=28.9156626506024, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI13236495, Length=332, Percent_Identity=28.9156626506024, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI47519420, Length=377, Percent_Identity=25.7294429708223, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI194239676, Length=321, Percent_Identity=27.1028037383178, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI22538446, Length=347, Percent_Identity=26.2247838616715, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI22538444, Length=347, Percent_Identity=26.2247838616715, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=357, Percent_Identity=27.7310924369748, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.6.5.5 [C]
Molecular weight: Translated: 35130; Mature: 34999
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTYPQTQSAIIITEFGEADVLQYRSDMVVPTLDTGMVLVKIAYAGINPVDYKTRQGLG CCCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC WGAQNIKDNQFAANQPAILGFDMAGEVVDSTVADFKPGDKVAALNFQGGCYAQYNTVDAQ CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHH VLTKVPEAVDLKTAGALPCVGTTAKQMIDFADIKPGEHVVMSAPAGGVGHLTLQMLVNAI HHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH EEKGIKITLICSAEKYQKIGSFIDPSKLEGWIDYTKQEAFPELEADLLLDLVGGEAGKKA HHCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCE LAVVKTGGRVVVLPSIWADELKKAGADKQLQVEGFIAKPNAQDLAAVLNQIAQGKLVLQI EEEEECCCEEEEECCCCHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCEEEEEE QDTYPLAKTADAHQALETVDSFGKIVLEM CCCCCCCCCCHHHHHHHHHHHHHHEEECC >Mature Secondary Structure SSTYPQTQSAIIITEFGEADVLQYRSDMVVPTLDTGMVLVKIAYAGINPVDYKTRQGLG CCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC WGAQNIKDNQFAANQPAILGFDMAGEVVDSTVADFKPGDKVAALNFQGGCYAQYNTVDAQ CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHH VLTKVPEAVDLKTAGALPCVGTTAKQMIDFADIKPGEHVVMSAPAGGVGHLTLQMLVNAI HHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH EEKGIKITLICSAEKYQKIGSFIDPSKLEGWIDYTKQEAFPELEADLLLDLVGGEAGKKA HHCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCE LAVVKTGGRVVVLPSIWADELKKAGADKQLQVEGFIAKPNAQDLAAVLNQIAQGKLVLQI EEEEECCCEEEEECCCCHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCEEEEEE QDTYPLAKTADAHQALETVDSFGKIVLEM CCCCCCCCCCHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.017 {9,10-phenanthrenequinone}} 0.0153 {2,6-dichlorophenolindophenol}} 0.013 {2,6-dichlorophenolindophenol}} 0.26 {1,4-naphthoquinone}} 0.065 {1,4-benzoquinone}} 0.007 {NADPH}} 0.0069 {NADPH}} 0.0024 {1,2-naphthoquinone}} [C]
Substrates: NADPH; Quinone [C]
Specific reaction: NADPH + Quinone = NADP(+) + Semiquinone. [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: 2, 3-Dimercaptopropanol; 2, 5-Dichloro-3, 6-dihydroxy -1, 4-benzoquinone; 4-Hydroxy coumarin; 5, 5'-Dithiobis (2-nitrobenzoate); ADP; Cibacronblue3GA; Coumarin; Cu2+; Dicoumarol warfarin, coumarin; Dithiothreitol preincubation with 9, 10-phenanthrenequino
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA