Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
---|---|
Accession | NC_009524 |
Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148651921
Identifier: 148651921
GI number: 148651921
Start: 123847
End: 125037
Strand: Direct
Name: 148651921
Synonym: PsycPRwf_0104
Alternate gene names: NA
Gene position: 123847-125037 (Clockwise)
Preceding gene: 148651919
Following gene: 148651922
Centisome position: 4.16
GC content: 45.09
Gene sequence:
>1191_bases GTGATATTGCGAGGTGAAACACAAGAAAACGGAGAGCTGCCAACCTTATCGTTTTCGCGTACCGATGGTATTGCCTTAAC CAAGAATAACCGCATCAAAGACTTAAACATTCAGGCCGATGCCTCACACCGTGCTATTTATAACATCTTGCAAGAACAAG ATTTGGGCAGCTTTCAATTTGAAAATCTAAGCCTAGTCGGGCAATTGTCATTCATCACCCGTCCAGGTACTAAGTCGGCC AAGGTCAGCATTAAAGATGTAGACATTATCGCCTGTGATGCGCGCCATTACCCAGAGCAGCCGCAAAAGTACGGCGTCAA TGTGCTTCAAGGTGCGCTGACTGTGTATAACTTTAATAGCGAAAAAGACAGTCGGATTGATTTAACGATAGACAATATTA CGATTGGTCGTAAAAATGCCCCTGTATTAGGCTCAGGCTTATTTGTTTCAGGCTTTGGTGATGAGGGTGGTACGGTTGTG GCTGATCGCATTACCACCGGTGCGGTGTATTCAAATGGTAAATTGCCGTTTGGCGTACCCGATATCATTACTGCCGCAAT CTTTATTGTCTATGGCGCCACTGTCAAACAGCTCACCCATAATGAGACCATCGTGACTTATGGCGTTAGCGATATGGTGT TAGATACTTGGGGACATGTGGATAACTGGCTGTCAGAAAAAGATGTTATCTCGTACGGCCCAAGCGGTATAGGATTCGTA AACTTCGGTACTGTGGGTAACTTTGTGGTAAAAGGCGATGTGAAGACTTATGGTCTAGGGGCACGTGGTTATAACCAGTA TGATGGGACAGTGGATAATATCGAATTTGGCAGCATCGAAACCTTCGGCGATGGCTCAATTGGTATTCAGTTAAGCCGTA AAATTGGCAAGCTGACTGTGCACCGTGATGTGATTACCCACGGTGGTGAAGGCCAGTCATTGGTGAAAGGGGTATTATCT ACCCTAAAAGCCATTGGCTTATCGGTTAAAGAGGGCGGAGAAGCTGAACAAATTAATATCGGTGGTAATTTAGAGACCCA AGGCAATGAGGTAAATACAGTAGAAGTTAATAAAGGCGGTAAAATTCATGCCATACAAGTGGGCGGTGGGATTGTTGCCA AAGGCGAGAAAAGCAAACGCCTAGATATCGAAGACGGTGCAGACGTACCTGAGTCTTTAAAAGAGGCTTAA
Upstream 100 bases:
>100_bases GCCGCCTAAGCCTAGACCATATAATACTGGACGACCAACGGCCACAGCATCTGCACCCATTGCCAAAGCACGTACAACAT CAATTACCTTAGCCCCTAAT
Downstream 100 bases:
>100_bases GGCAGACATTGTAGTGATGCTTTAGGCAAGGTGGCAGTCAAGATGGCATCGATATACAGAGTTAGGCTAGAGTTCTTAGC GTAACGGTATTATGCTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MILRGETQENGELPTLSFSRTDGIALTKNNRIKDLNIQADASHRAIYNILQEQDLGSFQFENLSLVGQLSFITRPGTKSA KVSIKDVDIIACDARHYPEQPQKYGVNVLQGALTVYNFNSEKDSRIDLTIDNITIGRKNAPVLGSGLFVSGFGDEGGTVV ADRITTGAVYSNGKLPFGVPDIITAAIFIVYGATVKQLTHNETIVTYGVSDMVLDTWGHVDNWLSEKDVISYGPSGIGFV NFGTVGNFVVKGDVKTYGLGARGYNQYDGTVDNIEFGSIETFGDGSIGIQLSRKIGKLTVHRDVITHGGEGQSLVKGVLS TLKAIGLSVKEGGEAEQINIGGNLETQGNEVNTVEVNKGGKIHAIQVGGGIVAKGEKSKRLDIEDGADVPESLKEA
Sequences:
>Translated_396_residues MILRGETQENGELPTLSFSRTDGIALTKNNRIKDLNIQADASHRAIYNILQEQDLGSFQFENLSLVGQLSFITRPGTKSA KVSIKDVDIIACDARHYPEQPQKYGVNVLQGALTVYNFNSEKDSRIDLTIDNITIGRKNAPVLGSGLFVSGFGDEGGTVV ADRITTGAVYSNGKLPFGVPDIITAAIFIVYGATVKQLTHNETIVTYGVSDMVLDTWGHVDNWLSEKDVISYGPSGIGFV NFGTVGNFVVKGDVKTYGLGARGYNQYDGTVDNIEFGSIETFGDGSIGIQLSRKIGKLTVHRDVITHGGEGQSLVKGVLS TLKAIGLSVKEGGEAEQINIGGNLETQGNEVNTVEVNKGGKIHAIQVGGGIVAKGEKSKRLDIEDGADVPESLKEA >Mature_396_residues MILRGETQENGELPTLSFSRTDGIALTKNNRIKDLNIQADASHRAIYNILQEQDLGSFQFENLSLVGQLSFITRPGTKSA KVSIKDVDIIACDARHYPEQPQKYGVNVLQGALTVYNFNSEKDSRIDLTIDNITIGRKNAPVLGSGLFVSGFGDEGGTVV ADRITTGAVYSNGKLPFGVPDIITAAIFIVYGATVKQLTHNETIVTYGVSDMVLDTWGHVDNWLSEKDVISYGPSGIGFV NFGTVGNFVVKGDVKTYGLGARGYNQYDGTVDNIEFGSIETFGDGSIGIQLSRKIGKLTVHRDVITHGGEGQSLVKGVLS TLKAIGLSVKEGGEAEQINIGGNLETQGNEVNTVEVNKGGKIHAIQVGGGIVAKGEKSKRLDIEDGADVPESLKEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42308; Mature: 42308
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRGETQENGELPTLSFSRTDGIALTKNNRIKDLNIQADASHRAIYNILQEQDLGSFQF CEECCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEE ENLSLVGQLSFITRPGTKSAKVSIKDVDIIACDARHYPEQPQKYGVNVLQGALTVYNFNS CCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCHHHCCHHHCCEEEEEEECC EKDSRIDLTIDNITIGRKNAPVLGSGLFVSGFGDEGGTVVADRITTGAVYSNGKLPFGVP CCCCEEEEEEEEEEECCCCCCEEECCEEEEEECCCCCEEEEECEEECEEEECCCCCCCCH DIITAAIFIVYGATVKQLTHNETIVTYGVSDMVLDTWGHVDNWLSEKDVISYGPSGIGFV HHHHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHCCHHHHCCCCCCEEECCCCCEEE NFGTVGNFVVKGDVKTYGLGARGYNQYDGTVDNIEFGSIETFGDGSIGIQLSRKIGKLTV EECCCCCEEEECCCEEEECCCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCCEEEE HRDVITHGGEGQSLVKGVLSTLKAIGLSVKEGGEAEQINIGGNLETQGNEVNTVEVNKGG EEHHHHCCCCCHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCEEEEEEECCCC KIHAIQVGGGIVAKGEKSKRLDIEDGADVPESLKEA EEEEEEECCEEEECCCCCCEECCCCCCCCCHHHHCC >Mature Secondary Structure MILRGETQENGELPTLSFSRTDGIALTKNNRIKDLNIQADASHRAIYNILQEQDLGSFQF CEECCCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEE ENLSLVGQLSFITRPGTKSAKVSIKDVDIIACDARHYPEQPQKYGVNVLQGALTVYNFNS CCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCHHHCCHHHCCEEEEEEECC EKDSRIDLTIDNITIGRKNAPVLGSGLFVSGFGDEGGTVVADRITTGAVYSNGKLPFGVP CCCCEEEEEEEEEEECCCCCCEEECCEEEEEECCCCCEEEEECEEECEEEECCCCCCCCH DIITAAIFIVYGATVKQLTHNETIVTYGVSDMVLDTWGHVDNWLSEKDVISYGPSGIGFV HHHHHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHCCHHHHCCCCCCEEECCCCCEEE NFGTVGNFVVKGDVKTYGLGARGYNQYDGTVDNIEFGSIETFGDGSIGIQLSRKIGKLTV EECCCCCEEEECCCEEEECCCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCCEEEE HRDVITHGGEGQSLVKGVLSTLKAIGLSVKEGGEAEQINIGGNLETQGNEVNTVEVNKGG EEHHHHCCCCCHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCEEEEEEECCCC KIHAIQVGGGIVAKGEKSKRLDIEDGADVPESLKEA EEEEEEECCEEEECCCCCCEECCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA