Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is terD [H]
Identifier: 148651894
GI number: 148651894
Start: 95318
End: 95893
Strand: Direct
Name: terD [H]
Synonym: PsycPRwf_0077
Alternate gene names: 148651894
Gene position: 95318-95893 (Clockwise)
Preceding gene: 148651893
Following gene: 148651895
Centisome position: 3.2
GC content: 47.57
Gene sequence:
>576_bases ATGGCTATTAGCTTAACCAAAGGCGGCAACGTTAACTTATCAAAAGAAGCCCCTGGTCTTACCAATATCACCATCGGCTT AGGCTGGGATCCACGCGCCACAGACGGCCAAGACTTCGATCTAGATGCCATCGCCTTTTTATTAAACGATGCAGGTAAAG TACGTAACGACCAAGACTTTATCTTCTTTAACAACCTAAAATCAGGTGATGGCTCAGTTGAGCACACAGGCGACAACCGC ACGGGTGAAGGTGATGGTGATGATGAAGCCATCAAAGTAGACCTAACTCGTGTGCCTAGCGATGTGTCTAAAATTGCGGT GTGTGCCATTATCTATGAAGGTCAAGCCCGCAACCAAAACTTCGGTCAAGTAGCCGATGCCTTTATTCGTGTAGTGAACG ACAATGGCGCGACTGAAATTGCTCGCTTTGATCTATCAGAAGATGGCAGCACCGAAACCGCTATGATTTTTGGTGAAATC TATCGCCACAACGGTGAGTGGAAATTCCGTGCAGTCGGTCAAGGTTTCAGCGGTGGTCTAGGTCCATTAGCGGCCTCTTA TGGTGTTGCGGTTTAA
Upstream 100 bases:
>100_bases TACTTTGAATGCGGGCAGCATCACACGTGAGCGAAGTTAATCCTTATTAATAAGCGATAACAAATTAAATAACCCCTAAA CAACAATAAAGGACAATATC
Downstream 100 bases:
>100_bases TACACGAGTCAGCAGATAGATAAACGCTTAGAGGGGTGTCTGCCTGTCTAAGCCAATTGAGTAAAAGAACGGCGTAAAAG GACAGTATCATGGCGGCAAC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAISLTKGGNVNLSKEAPGLTNITIGLGWDPRATDGQDFDLDAIAFLLNDAGKVRNDQDFIFFNNLKSGDGSVEHTGDNR TGEGDGDDEAIKVDLTRVPSDVSKIAVCAIIYEGQARNQNFGQVADAFIRVVNDNGATEIARFDLSEDGSTETAMIFGEI YRHNGEWKFRAVGQGFSGGLGPLAASYGVAV
Sequences:
>Translated_191_residues MAISLTKGGNVNLSKEAPGLTNITIGLGWDPRATDGQDFDLDAIAFLLNDAGKVRNDQDFIFFNNLKSGDGSVEHTGDNR TGEGDGDDEAIKVDLTRVPSDVSKIAVCAIIYEGQARNQNFGQVADAFIRVVNDNGATEIARFDLSEDGSTETAMIFGEI YRHNGEWKFRAVGQGFSGGLGPLAASYGVAV >Mature_190_residues AISLTKGGNVNLSKEAPGLTNITIGLGWDPRATDGQDFDLDAIAFLLNDAGKVRNDQDFIFFNNLKSGDGSVEHTGDNRT GEGDGDDEAIKVDLTRVPSDVSKIAVCAIIYEGQARNQNFGQVADAFIRVVNDNGATEIARFDLSEDGSTETAMIFGEIY RHNGEWKFRAVGQGFSGGLGPLAASYGVAV
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20337; Mature: 20205
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISLTKGGNVNLSKEAPGLTNITIGLGWDPRATDGQDFDLDAIAFLLNDAGKVRNDQDF CEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE IFFNNLKSGDGSVEHTGDNRTGEGDGDDEAIKVDLTRVPSDVSKIAVCAIIYEGQARNQN EEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEEECCCCCCCC FGQVADAFIRVVNDNGATEIARFDLSEDGSTETAMIFGEIYRHNGEWKFRAVGQGFSGGL HHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCC GPLAASYGVAV CHHHHHCCCCC >Mature Secondary Structure AISLTKGGNVNLSKEAPGLTNITIGLGWDPRATDGQDFDLDAIAFLLNDAGKVRNDQDF EEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCE IFFNNLKSGDGSVEHTGDNRTGEGDGDDEAIKVDLTRVPSDVSKIAVCAIIYEGQARNQN EEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEEECCCCCCCC FGQVADAFIRVVNDNGATEIARFDLSEDGSTETAMIFGEIYRHNGEWKFRAVGQGFSGGL HHHHHHHHEEEECCCCCCEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCC GPLAASYGVAV CHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]