Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148651895

Identifier: 148651895

GI number: 148651895

Start: 95983

End: 96735

Strand: Direct

Name: 148651895

Synonym: PsycPRwf_0078

Alternate gene names: NA

Gene position: 95983-96735 (Clockwise)

Preceding gene: 148651894

Following gene: 148651896

Centisome position: 3.22

GC content: 47.01

Gene sequence:

>753_bases
ATGGCGGCAACCTTTAGTCTTATTGGCACAATTGAGCCATTTTTACATTGTAATTTAAAGCCTGGCGACTCTATTTATTG
TGAAGCCAATGCGATGGTTATGATGGAGAATAATCTTGAGCTAAAGGGTAAGTTGCAAGGCGGTCTGATGCAGTCCTTGA
TGCGCCGATTTGCCAATGATGAATCACTGTTTCAACAAGAGATTGCTGCCACAAATGGGGAAGGGGACTGCTTATTGGCC
CCCACCTTAGATGGTGACATGCAGATTTTGGATATTGGCCCTCAGCAATATACATTAAGTGATGGCGCCTTTGTGGCAGC
TACCCGAGAGGTTGAAGTAAAGGCCAATATCCAGCGCAACTTAGGTGGTGCGGTATTCGGTGATACCGGCGGATTTGTGG
TGATGCAGACCCAAGGCCAAGGTCAGCTGGTGGTCTCAGGCTTTGGCTCTTTATTTGAGATTGAGGTGACGCCCGGCAAA
GATGTGGTCATCGACAATGGTCATGTGGTGTGCTGGGACTCTAATCTGCAGTACAGTTTATCGGTCTCAACCAGTAAGAA
AAAAGGCTTTATGAGTAATATCATCAACTCCGTCACCAGTGGCGAGGGGATGGTGCTAAATTTCTCAGGTCAAGGTAAGG
TCATCATCTGTTCACGTAACCGAGACACCTATCGAGGCTGGGTACAAAGCATTTTGGGCAGTAGCTCAGGCGGACGCGGT
GGCAGTGGCGGATTTTTAGATAATATTTTATAA

Upstream 100 bases:

>100_bases
TTGCGGTTTAATACACGAGTCAGCAGATAGATAAACGCTTAGAGGGGTGTCTGCCTGTCTAAGCCAATTGAGTAAAAGAA
CGGCGTAAAAGGACAGTATC

Downstream 100 bases:

>100_bases
CGCTGACAATTACAGCCATCACGCCTGCATAAATTCATATATCAAGGATAAGTAACATGGCAGTTAATCTGCAAAAAGGA
CAAAAGATTTCACTGAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAATFSLIGTIEPFLHCNLKPGDSIYCEANAMVMMENNLELKGKLQGGLMQSLMRRFANDESLFQQEIAATNGEGDCLLA
PTLDGDMQILDIGPQQYTLSDGAFVAATREVEVKANIQRNLGGAVFGDTGGFVVMQTQGQGQLVVSGFGSLFEIEVTPGK
DVVIDNGHVVCWDSNLQYSLSVSTSKKKGFMSNIINSVTSGEGMVLNFSGQGKVIICSRNRDTYRGWVQSILGSSSGGRG
GSGGFLDNIL

Sequences:

>Translated_250_residues
MAATFSLIGTIEPFLHCNLKPGDSIYCEANAMVMMENNLELKGKLQGGLMQSLMRRFANDESLFQQEIAATNGEGDCLLA
PTLDGDMQILDIGPQQYTLSDGAFVAATREVEVKANIQRNLGGAVFGDTGGFVVMQTQGQGQLVVSGFGSLFEIEVTPGK
DVVIDNGHVVCWDSNLQYSLSVSTSKKKGFMSNIINSVTSGEGMVLNFSGQGKVIICSRNRDTYRGWVQSILGSSSGGRG
GSGGFLDNIL
>Mature_249_residues
AATFSLIGTIEPFLHCNLKPGDSIYCEANAMVMMENNLELKGKLQGGLMQSLMRRFANDESLFQQEIAATNGEGDCLLAP
TLDGDMQILDIGPQQYTLSDGAFVAATREVEVKANIQRNLGGAVFGDTGGFVVMQTQGQGQLVVSGFGSLFEIEVTPGKD
VVIDNGHVVCWDSNLQYSLSVSTSKKKGFMSNIINSVTSGEGMVLNFSGQGKVIICSRNRDTYRGWVQSILGSSSGGRGG
SGGFLDNIL

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 26656; Mature: 26524

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATFSLIGTIEPFLHCNLKPGDSIYCEANAMVMMENNLELKGKLQGGLMQSLMRRFAND
CCCEEEHHCCCCCEEEECCCCCCEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHHCCC
ESLFQQEIAATNGEGDCLLAPTLDGDMQILDIGPQQYTLSDGAFVAATREVEVKANIQRN
HHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEECCCEEEEEEEEEEEEEEEECC
LGGAVFGDTGGFVVMQTQGQGQLVVSGFGSLFEIEVTPGKDVVIDNGHVVCWDSNLQYSL
CCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECCEEEEEECCCEEEE
SVSTSKKKGFMSNIINSVTSGEGMVLNFSGQGKVIICSRNRDTYRGWVQSILGSSSGGRG
EECCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
GSGGFLDNIL
CCCCCHHCCC
>Mature Secondary Structure 
AATFSLIGTIEPFLHCNLKPGDSIYCEANAMVMMENNLELKGKLQGGLMQSLMRRFAND
CCEEEHHCCCCCEEEECCCCCCEEEEECCEEEEEECCCEEEEEECHHHHHHHHHHHCCC
ESLFQQEIAATNGEGDCLLAPTLDGDMQILDIGPQQYTLSDGAFVAATREVEVKANIQRN
HHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEECCCEEEEEEEEEEEEEEEECC
LGGAVFGDTGGFVVMQTQGQGQLVVSGFGSLFEIEVTPGKDVVIDNGHVVCWDSNLQYSL
CCCEEEECCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEECCEEEEEECCCEEEE
SVSTSKKKGFMSNIINSVTSGEGMVLNFSGQGKVIICSRNRDTYRGWVQSILGSSSGGRG
EECCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
GSGGFLDNIL
CCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA