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The map label for this gene is ybhL [C]

Identifier: 148550821

GI number: 148550821

Start: 292607

End: 293332

Strand: Direct

Name: ybhL [C]

Synonym: Swit_5385

Alternate gene names: 148550821

Gene position: 292607-293332 (Clockwise)

Preceding gene: 148550820

Following gene: 148550822

Centisome position: 94.32

GC content: 60.61

Gene sequence:

>726_bases
ATGGATTCATTGTTCAATCGGACGATGCCTTCGCAGCGCAGGGCAAGCCCCATCGACCGGGGCTTCGATGCCGGCCTGCG
AAACCACATGATCGGCATCTATCGCAACATGGCGCTTGGTCTTGCCCTTACCGGTCTGGTCGCGTTTGGCGTTGCGTCCA
CGCCGGCCTTGTACGAGCCCATCTTCGGCACGCCGCTAAAGTGGGTGGCGATCTTTGCGCCTCTGGCTTTCGTACTTCTG
CTATCATTCGGCCTACATCAGATGTCGGCCGCCATGGCCCAGACAGCCTATTTCGTCTTCGCCGGCGTCATGGGCATCTC
GATGGCCAGCATCTTCCTGATGTTCACGGGCGAGAGCATTGCGCTCGCCTTCTTTACGGCCGCTGCGGTGTTCGCGGCGA
TGAGCCTATGGGGCTATACCACCGGCGCTGACCTGTCGCGTTGGGCCCCGATCCTGATGGTGGGTCTGCTCGCTGTCGTG
GCGGCCAGCATCGTCACCCTGTTTCTGGGATCCTCGACGCTGCAGATGCTGTTCTCGATTGCGGGGATCGTGGTGTTCAC
CGGTCTGACGGCCTGGGATACGCAGCGTCTCAGGAACGAATATTACGCCTATGCCGGGCAGGAAGAGGCGGGCAAACTCG
CCATCGTTGGCGCGCTCTCGCTCTATCTCAACCTGATCAACCTGTTCCAGTTGCTGCTGACCTTCATGGGTCAGCGGCGC
GGGTAA

Upstream 100 bases:

>100_bases
GAACGACAGGCCGGCGCACCGGGCGTGCTCGGTGTTGCGGTTCGCTATAAGCCTCTCGCTGCGCCAGCGCGATCTGTCGT
CTTAATCGATGGAGAGAGCT

Downstream 100 bases:

>100_bases
AGGAGGACGGCATGCACGACACCTCGCTCTGGCGCGGCGTCCCGCTGGTGGCGCAAAACTGGAAATGGATGATGGTTCGC
GGTGTCCTGGGTCTGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDSLFNRTMPSQRRASPIDRGFDAGLRNHMIGIYRNMALGLALTGLVAFGVASTPALYEPIFGTPLKWVAIFAPLAFVLL
LSFGLHQMSAAMAQTAYFVFAGVMGISMASIFLMFTGESIALAFFTAAAVFAAMSLWGYTTGADLSRWAPILMVGLLAVV
AASIVTLFLGSSTLQMLFSIAGIVVFTGLTAWDTQRLRNEYYAYAGQEEAGKLAIVGALSLYLNLINLFQLLLTFMGQRR
G

Sequences:

>Translated_241_residues
MDSLFNRTMPSQRRASPIDRGFDAGLRNHMIGIYRNMALGLALTGLVAFGVASTPALYEPIFGTPLKWVAIFAPLAFVLL
LSFGLHQMSAAMAQTAYFVFAGVMGISMASIFLMFTGESIALAFFTAAAVFAAMSLWGYTTGADLSRWAPILMVGLLAVV
AASIVTLFLGSSTLQMLFSIAGIVVFTGLTAWDTQRLRNEYYAYAGQEEAGKLAIVGALSLYLNLINLFQLLLTFMGQRR
G
>Mature_241_residues
MDSLFNRTMPSQRRASPIDRGFDAGLRNHMIGIYRNMALGLALTGLVAFGVASTPALYEPIFGTPLKWVAIFAPLAFVLL
LSFGLHQMSAAMAQTAYFVFAGVMGISMASIFLMFTGESIALAFFTAAAVFAAMSLWGYTTGADLSRWAPILMVGLLAVV
AASIVTLFLGSSTLQMLFSIAGIVVFTGLTAWDTQRLRNEYYAYAGQEEAGKLAIVGALSLYLNLINLFQLLLTFMGQRR
G

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=220, Percent_Identity=39.0909090909091, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26015; Mature: 26015

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]