Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550820

Identifier: 148550820

GI number: 148550820

Start: 292116

End: 292433

Strand: Direct

Name: 148550820

Synonym: Swit_5384

Alternate gene names: NA

Gene position: 292116-292433 (Clockwise)

Preceding gene: 148550819

Following gene: 148550821

Centisome position: 94.16

GC content: 58.18

Gene sequence:

>318_bases
TTGCTTAGGCCAAATTTAACCCCGGTTGGCGACACGCTTCCTAAGGACCTCGACCTGTCGAGCAACCTCGCATTTTTGTT
CTCGTGGTTCCTCGTTTCAGCGTTAGGGCTGCTGCCGCTGTTCGGCGAAACGCTCCCACGTGATCCCACACCTTCCGCGT
CGGCACTGATCGTCTTTTTCGTTGCTGTTGGATCGGCCGCCGTGCTCAGGCGGCACTACAGCTGGGTTGGCCTCGTCATG
CACGTCTCCAGCCAGATTTTCATGTGGCTATCCGTGTTCTGCGTTTCGCTCGCGGGCGTCCTTTATGCGGCCGGATAG

Upstream 100 bases:

>100_bases
GATGTAGGTATCGATGTCGAACGACATAGAAATCTCCTAAGCCCCGAAAATATACCCGAAACGCCGCCACCTCTCAAGTC
CTGGCGACGGACAACGAACC

Downstream 100 bases:

>100_bases
AGGCAGGGCACAGGTCTTGAATCCGCGGAAAACGAAACACATTTTTCTGATCGTGGGCCGGGCTTGTCGCGCTGAACGAC
AGGCCGGCGCACCGGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLRPNLTPVGDTLPKDLDLSSNLAFLFSWFLVSALGLLPLFGETLPRDPTPSASALIVFFVAVGSAAVLRRHYSWVGLVM
HVSSQIFMWLSVFCVSLAGVLYAAG

Sequences:

>Translated_105_residues
MLRPNLTPVGDTLPKDLDLSSNLAFLFSWFLVSALGLLPLFGETLPRDPTPSASALIVFFVAVGSAAVLRRHYSWVGLVM
HVSSQIFMWLSVFCVSLAGVLYAAG
>Mature_105_residues
MLRPNLTPVGDTLPKDLDLSSNLAFLFSWFLVSALGLLPLFGETLPRDPTPSASALIVFFVAVGSAAVLRRHYSWVGLVM
HVSSQIFMWLSVFCVSLAGVLYAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11356; Mature: 11356

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPNLTPVGDTLPKDLDLSSNLAFLFSWFLVSALGLLPLFGETLPRDPTPSASALIVFF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VAVGSAAVLRRHYSWVGLVMHVSSQIFMWLSVFCVSLAGVLYAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRPNLTPVGDTLPKDLDLSSNLAFLFSWFLVSALGLLPLFGETLPRDPTPSASALIVFF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VAVGSAAVLRRHYSWVGLVMHVSSQIFMWLSVFCVSLAGVLYAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA