Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
---|---|
Accession | NC_009507 |
Length | 310,228 |
Click here to switch to the map view.
The map label for this gene is 148550809
Identifier: 148550809
GI number: 148550809
Start: 280385
End: 281032
Strand: Direct
Name: 148550809
Synonym: Swit_5373
Alternate gene names: NA
Gene position: 280385-281032 (Clockwise)
Preceding gene: 148550808
Following gene: 148550810
Centisome position: 90.38
GC content: 66.51
Gene sequence:
>648_bases ATGGCTGAGCAGGCTGAACTCGATCTTCCTCCCGTCCCCGCGCCGTCTGGCAAAGCCGCGCGCTCGCGCCGCGCGGCCCT TTTCGCAGGATTGACCCGCTGGCAGATGCTGGGCGGGCTGATGCTGCTCGCGGCGCTCGTCTGGGCGATGTGGGTGACCC GGCAGGTGAGTGCCCGGACCGATCATATCGTTTCGGTCAAGCTCTCCGAACTGGTCGGCGAATATGTCGAGGCGCAGCGC TACTCAGCATCGCCACCTGAGCGGGTCAAGGCCGAGATGCAGGCCTTCATGGCATCGCTCGACAAGGAGCTTGCGCGTCG CAGCGCCCATGGCGACGTCATCCTCGTGGGCGAGGCCGTGCTCAGCAAGAATGTCGATGACATCACGGAAACGGTGAAGA AGGCAGTCTATGCTTCGGGCGTGCCGATACCCAAGCGGATTACGGCCGAGGAGCTGCAGCGCCTGCAGCAAATGAGCCTG CAGGCGGCGCCCGAAATGCCCGTGCCGCAGGATCCGCGGACGACCGCGCCGGCGAGCGCCGCACAAGCCACTGCCCAACC GGTTCCATCCGTCCTTCCCCCGGCCGTTGGCGCCCAGGGAGCCACCGTCTCGAGCTTTGGAGCGCCCGATGTCGGCCCTG CTCAGTGA
Upstream 100 bases:
>100_bases CAGGTGCTGGCCGGCGCGCAGCTTCTCCTGGCCGGCGCGATCATCGTGCTGCGCCGACATCTCATCATTCCGCGTCATGT GTCTGAAGGGAACCGTTCCC
Downstream 100 bases:
>100_bases CAGGGGCGAAACCCCGGTGGTGCCGGCTCGCGCAGCGCCGGCCTGGCGACCGCGCAAGCATCTCTGGGCGGCGCTGGGGC TCCTGTCGGTCGGCACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAEQAELDLPPVPAPSGKAARSRRAALFAGLTRWQMLGGLMLLAALVWAMWVTRQVSARTDHIVSVKLSELVGEYVEAQR YSASPPERVKAEMQAFMASLDKELARRSAHGDVILVGEAVLSKNVDDITETVKKAVYASGVPIPKRITAEELQRLQQMSL QAAPEMPVPQDPRTTAPASAAQATAQPVPSVLPPAVGAQGATVSSFGAPDVGPAQ
Sequences:
>Translated_215_residues MAEQAELDLPPVPAPSGKAARSRRAALFAGLTRWQMLGGLMLLAALVWAMWVTRQVSARTDHIVSVKLSELVGEYVEAQR YSASPPERVKAEMQAFMASLDKELARRSAHGDVILVGEAVLSKNVDDITETVKKAVYASGVPIPKRITAEELQRLQQMSL QAAPEMPVPQDPRTTAPASAAQATAQPVPSVLPPAVGAQGATVSSFGAPDVGPAQ >Mature_214_residues AEQAELDLPPVPAPSGKAARSRRAALFAGLTRWQMLGGLMLLAALVWAMWVTRQVSARTDHIVSVKLSELVGEYVEAQRY SASPPERVKAEMQAFMASLDKELARRSAHGDVILVGEAVLSKNVDDITETVKKAVYASGVPIPKRITAEELQRLQQMSLQ AAPEMPVPQDPRTTAPASAAQATAQPVPSVLPPAVGAQGATVSSFGAPDVGPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22784; Mature: 22653
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQAELDLPPVPAPSGKAARSRRAALFAGLTRWQMLGGLMLLAALVWAMWVTRQVSART CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHIVSVKLSELVGEYVEAQRYSASPPERVKAEMQAFMASLDKELARRSAHGDVILVGEAV CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH LSKNVDDITETVKKAVYASGVPIPKRITAEELQRLQQMSLQAAPEMPVPQDPRTTAPASA HHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH AQATAQPVPSVLPPAVGAQGATVSSFGAPDVGPAQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEQAELDLPPVPAPSGKAARSRRAALFAGLTRWQMLGGLMLLAALVWAMWVTRQVSART CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHIVSVKLSELVGEYVEAQRYSASPPERVKAEMQAFMASLDKELARRSAHGDVILVGEAV CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH LSKNVDDITETVKKAVYASGVPIPKRITAEELQRLQQMSLQAAPEMPVPQDPRTTAPASA HHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH AQATAQPVPSVLPPAVGAQGATVSSFGAPDVGPAQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA