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The map label for this gene is 148550810

Identifier: 148550810

GI number: 148550810

Start: 281013

End: 281576

Strand: Direct

Name: 148550810

Synonym: Swit_5374

Alternate gene names: NA

Gene position: 281013-281576 (Clockwise)

Preceding gene: 148550809

Following gene: 148550811

Centisome position: 90.58

GC content: 67.02

Gene sequence:

>564_bases
ATGTCGGCCCTGCTCAGTGACAGGGGCGAAACCCCGGTGGTGCCGGCTCGCGCAGCGCCGGCCTGGCGACCGCGCAAGCA
TCTCTGGGCGGCGCTGGGGCTCCTGTCGGTCGGCACCGTGGTTCTGGGCGCGATCGCGGATTGGCGCGATCGTCATGCCT
TCCTCATCAACACGAGCGAGTCCCTGCCGAACTGGGCGTTCCTCATCGATCGGGGCCGAATGCCGGCCCGCGGTGACTAT
GTCTTCTTCGACCCGCCCGCGACCGCTCTCGTCCACCGTCATTTCGGAGCGCGGCCCGCTATGTTCGGCAAGCTGGTTTA
TGGTCTGCCCGGCGATGTTGTTTCCCATAGCGGCAACGACGTCCTGATCGAAGGGCGCCTGGTGGCGCGCATGAAGCGAG
CCTCGCGCCTGGGCGAATTGTTGACGCCCGGCGCGACCGGGCCGGTCCCGGCGGGCTGCTATTTTGTCGGGACGCCGCAC
AAGGACGGGTTCGACAGCCGCTATGCTGACATCGGCTTCGTCTGCGCGCGCCGGATTATCGGTACCGGGAAGCCGCTACT
ATGA

Upstream 100 bases:

>100_bases
CCGGCGAGCGCCGCACAAGCCACTGCCCAACCGGTTCCATCCGTCCTTCCCCCGGCCGTTGGCGCCCAGGGAGCCACCGT
CTCGAGCTTTGGAGCGCCCG

Downstream 100 bases:

>100_bases
CGCGCACCATCCTGCTGGCGGCGACAACCGCATGCCTGGGCGGCGCGACCCTGTTTCTTGTCGGCTCCGCCAGCGAGGCG
CGCGATTATGGAACGGCAGG

Product: type IV secretory pathway protease TraF-like protein

Products: NA

Alternate protein names: F Pilus Assembly Protein TraF; Conjugal Transfer Protein; Type IV Secretory Pathway Protease TraF-Like; Type IV Secretory Pathway Protease TraF-Like Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSALLSDRGETPVVPARAAPAWRPRKHLWAALGLLSVGTVVLGAIADWRDRHAFLINTSESLPNWAFLIDRGRMPARGDY
VFFDPPATALVHRHFGARPAMFGKLVYGLPGDVVSHSGNDVLIEGRLVARMKRASRLGELLTPGATGPVPAGCYFVGTPH
KDGFDSRYADIGFVCARRIIGTGKPLL

Sequences:

>Translated_187_residues
MSALLSDRGETPVVPARAAPAWRPRKHLWAALGLLSVGTVVLGAIADWRDRHAFLINTSESLPNWAFLIDRGRMPARGDY
VFFDPPATALVHRHFGARPAMFGKLVYGLPGDVVSHSGNDVLIEGRLVARMKRASRLGELLTPGATGPVPAGCYFVGTPH
KDGFDSRYADIGFVCARRIIGTGKPLL
>Mature_186_residues
SALLSDRGETPVVPARAAPAWRPRKHLWAALGLLSVGTVVLGAIADWRDRHAFLINTSESLPNWAFLIDRGRMPARGDYV
FFDPPATALVHRHFGARPAMFGKLVYGLPGDVVSHSGNDVLIEGRLVARMKRASRLGELLTPGATGPVPAGCYFVGTPHK
DGFDSRYADIGFVCARRIIGTGKPLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20225; Mature: 20093

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLSDRGETPVVPARAAPAWRPRKHLWAALGLLSVGTVVLGAIADWRDRHAFLINTSE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SLPNWAFLIDRGRMPARGDYVFFDPPATALVHRHFGARPAMFGKLVYGLPGDVVSHSGND
CCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCE
VLIEGRLVARMKRASRLGELLTPGATGPVPAGCYFVGTPHKDGFDSRYADIGFVCARRII
EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
GTGKPLL
CCCCCCC
>Mature Secondary Structure 
SALLSDRGETPVVPARAAPAWRPRKHLWAALGLLSVGTVVLGAIADWRDRHAFLINTSE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SLPNWAFLIDRGRMPARGDYVFFDPPATALVHRHFGARPAMFGKLVYGLPGDVVSHSGND
CCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCE
VLIEGRLVARMKRASRLGELLTPGATGPVPAGCYFVGTPHKDGFDSRYADIGFVCARRII
EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH
GTGKPLL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA