The gene/protein map for NC_009507 is currently unavailable.
Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

Click here to switch to the map view.

The map label for this gene is 148550808

Identifier: 148550808

GI number: 148550808

Start: 280018

End: 280392

Strand: Direct

Name: 148550808

Synonym: Swit_5372

Alternate gene names: NA

Gene position: 280018-280392 (Clockwise)

Preceding gene: 148550807

Following gene: 148550809

Centisome position: 90.26

GC content: 61.87

Gene sequence:

>375_bases
GTGGCAACGATCGCGAGCGAAGAGACCCTTAAGCCCAGCTCATCAGCGGCGGCTAACCCGCGCATCCGGCTCGACCTGCG
CACGATCCTCTATTGGTATCTCCACCTTTTCGGCTTCACCCTGTCGTCGCTGCTGATCAGCTGGGGGCTGTTCTTTCTCT
TCTTTCTGGCGATCGGCGGCTTCTCGATCGACGGCATGATGCACCAGCTGGCCAATATGGCGAGCCGCTATGTCGCCGCG
GACCCAGCGCGCATCGCATCCTTCAAGCAGGTGCTGGCCGGCGCGCAGCTTCTCCTGGCCGGCGCGATCATCGTGCTGCG
CCGACATCTCATCATTCCGCGTCATGTGTCTGAAGGGAACCGTTCCCATGGCTGA

Upstream 100 bases:

>100_bases
ACGAGGCGATCGAGCGCATCGCCTTTCCCGACAACCCCGAGAAATGGGCGGCGAACGCGGAGAGTGATCCCGACGTCGCA
ATCGCCGCGGAGTAGGTACG

Downstream 100 bases:

>100_bases
GCAGGCTGAACTCGATCTTCCTCCCGTCCCCGCGCCGTCTGGCAAAGCCGCGCGCTCGCGCCGCGCGGCCCTTTTCGCAG
GATTGACCCGCTGGCAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MATIASEETLKPSSSAAANPRIRLDLRTILYWYLHLFGFTLSSLLISWGLFFLFFLAIGGFSIDGMMHQLANMASRYVAA
DPARIASFKQVLAGAQLLLAGAIIVLRRHLIIPRHVSEGNRSHG

Sequences:

>Translated_124_residues
MATIASEETLKPSSSAAANPRIRLDLRTILYWYLHLFGFTLSSLLISWGLFFLFFLAIGGFSIDGMMHQLANMASRYVAA
DPARIASFKQVLAGAQLLLAGAIIVLRRHLIIPRHVSEGNRSHG
>Mature_123_residues
ATIASEETLKPSSSAAANPRIRLDLRTILYWYLHLFGFTLSSLLISWGLFFLFFLAIGGFSIDGMMHQLANMASRYVAAD
PARIASFKQVLAGAQLLLAGAIIVLRRHLIIPRHVSEGNRSHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13669; Mature: 13538

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIASEETLKPSSSAAANPRIRLDLRTILYWYLHLFGFTLSSLLISWGLFFLFFLAIGG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSIDGMMHQLANMASRYVAADPARIASFKQVLAGAQLLLAGAIIVLRRHLIIPRHVSEGN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RSHG
CCCC
>Mature Secondary Structure 
ATIASEETLKPSSSAAANPRIRLDLRTILYWYLHLFGFTLSSLLISWGLFFLFFLAIGG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSIDGMMHQLANMASRYVAADPARIASFKQVLAGAQLLLAGAIIVLRRHLIIPRHVSEGN
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RSHG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA