Click here to switch to the map view.

The map label for this gene is yjlB [H]

Identifier: 148550720

GI number: 148550720

Start: 183965

End: 184459

Strand: Direct

Name: yjlB [H]

Synonym: Swit_5284

Alternate gene names: 148550720

Gene position: 183965-184459 (Clockwise)

Preceding gene: 148550719

Following gene: 148550721

Centisome position: 59.3

GC content: 65.66

Gene sequence:

>495_bases
ATGATGGAGATCGAAAGCTTCCTGCTCGGCGAGAATGACTGGGTGCCGAACAATGCGCGGTTGCCGGTCGTCATCTATCG
CAGCGCGCTGGACGGCGAGGGCGAAGACCTGGCCGGCCGGTTCGAGGCCTTGTTCGAGGATCATGGTTGGCCGCCGGATT
GGCGCGACGGCGTATTCGATTATCACCATTATCATTCGACCGCACACGAGGTTTTGGGCGTGTTCGCGGGCGAAGCGACG
CTCGAGCTTGGCGGGCCAGACGGGCGCAAGGTGTCCGTCGCAGGCGGCGATGCGCTCATGCTGCCGACCGGCACCGGCCA
CCGCGCCATCGATGCGAGCGAGAATTTCCAGGTTGTCGGTGCCTATCCGCGGGGACAGGGCTGGGACATCTGCCGCGAAG
CGCCCGACGATGCGGCGCGCGCGCGGATGGAGGCGCTTCCCGATCCGAAGCATGACCCCGTTACCGGCGAAATGGGGGCA
AGGACTGGCGCCTGA

Upstream 100 bases:

>100_bases
ACCGCCATGTCCGGGGCTGGGAAAAGACCAGCGACCATGCCCCGGTCTGGATCGAACTGGCCGACAAGCCAAAGCGCAAG
CGAGCCCCCAAGGCGAAAAT

Downstream 100 bases:

>100_bases
TCATGACAGGCGCATAGGAGGATCGAGCCTTGCTCTTGGACAGTGCGAACCAGAGTCCGGCTTGGGTGGGGAACGCGAAC
CCGTGCTGGACGCTTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MMEIESFLLGENDWVPNNARLPVVIYRSALDGEGEDLAGRFEALFEDHGWPPDWRDGVFDYHHYHSTAHEVLGVFAGEAT
LELGGPDGRKVSVAGGDALMLPTGTGHRAIDASENFQVVGAYPRGQGWDICREAPDDAARARMEALPDPKHDPVTGEMGA
RTGA

Sequences:

>Translated_164_residues
MMEIESFLLGENDWVPNNARLPVVIYRSALDGEGEDLAGRFEALFEDHGWPPDWRDGVFDYHHYHSTAHEVLGVFAGEAT
LELGGPDGRKVSVAGGDALMLPTGTGHRAIDASENFQVVGAYPRGQGWDICREAPDDAARARMEALPDPKHDPVTGEMGA
RTGA
>Mature_164_residues
MMEIESFLLGENDWVPNNARLPVVIYRSALDGEGEDLAGRFEALFEDHGWPPDWRDGVFDYHHYHSTAHEVLGVFAGEAT
LELGGPDGRKVSVAGGDALMLPTGTGHRAIDASENFQVVGAYPRGQGWDICREAPDDAARARMEALPDPKHDPVTGEMGA
RTGA

Specific function: Unknown

COG id: COG4297

COG function: function code S; Uncharacterized protein containing double-stranded beta helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710
- InterPro:   IPR014500 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 17799; Mature: 17799

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEIESFLLGENDWVPNNARLPVVIYRSALDGEGEDLAGRFEALFEDHGWPPDWRDGVFD
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
YHHYHSTAHEVLGVFAGEATLELGGPDGRKVSVAGGDALMLPTGTGHRAIDASENFQVVG
HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEECCCCCEEECCCCCEEEEE
AYPRGQGWDICREAPDDAARARMEALPDPKHDPVTGEMGARTGA
CCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMEIESFLLGENDWVPNNARLPVVIYRSALDGEGEDLAGRFEALFEDHGWPPDWRDGVFD
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
YHHYHSTAHEVLGVFAGEATLELGGPDGRKVSVAGGDALMLPTGTGHRAIDASENFQVVG
HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEECCCCCEEECCCCCEEEEE
AYPRGQGWDICREAPDDAARARMEALPDPKHDPVTGEMGARTGA
CCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]