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The map label for this gene is 148550721

Identifier: 148550721

GI number: 148550721

Start: 184563

End: 185678

Strand: Direct

Name: 148550721

Synonym: Swit_5285

Alternate gene names: NA

Gene position: 184563-185678 (Clockwise)

Preceding gene: 148550720

Following gene: 148550723

Centisome position: 59.49

GC content: 60.75

Gene sequence:

>1116_bases
ATGAAAACACAAGAGGACGCGCCGGCCGACACCGGCGAGGCAGGAACGATCGTCGATGCGCAGGAAGCCGCGGAAAATGC
GGGTCTCGTCTACGTAACCGACGACAGCCCGGGAATCGTCCGCCAGCCCTACCGTGGCAAGTTTCGCTATCGCGATGCCC
GGGGCAACGTCGTGACGGACGAAAAAACCCTGAAGCGGATCGCTTCGCTCGCCATCCCCCCGGCCTATACCGATGTCTGG
ATCTGCCCCAAAGCAAACGGGCACATCCAGGCGACCGGCCGTGACGCAAAGGGCCGCAAGCAGTATCGTTACCATCCGCG
TTTCCGCGAGGTGCGCGACAGCACCAAGTACGAGCACATGCTGGACTTCGCAAAGGCCCTTCCTGGCGTGCGCGAACGCA
TCGATGCCGATCTCAAGAAGCGCGGGCTACCGCGCGAGAAGGTCCTGGCCGCCGTCGTGCATCTTCTCGAGACAACGATG
ATCCGCATCGGCAACGCGGATTATGCCAAGCAAAACAAGAGTTATGGGCTCACGACCCTCCAGGACCGCCATGTCGCGAT
TGACGGCGCTGAGCTCCGATTCAATTTCAAGGGCAAGAGCGGAAAGCAGTGGCGGCTGAAGCTGAAGGATCGGCGCATCG
CGAAGATCGTCAAGGCCAGCCAGGATCTGCCCGGACAGCATCTGTTCCAATATGTGGGCGAAGACGGCGCGCAGTACGAA
GTCACCTCGAACGATATCAACGCTTATCTTCGGGAGATTTCCGGGACGGACATCACCGCCAAGGATTTCCGCACCTGGAA
TGGCACGGTGCTCGCCGCTCTGGCGCTGTCCGAATATGAAAAGGTCGACAGCCAGGCTGCGGCGAAACGAAATGTCCGGA
CCGCAATCGAAGCCGTCGCTTCGCGGCTTGGCAACACGCCCACTGTGTGCCGCAAGTGCTACATTCATCCCGAAGTTTTC
GAGAGCTACCTGAGCGACGAATTGGTCCTGGAAGCGCGGGACGCCGTCGAGAAGGAGCTTCGGGAAGACTTGTCCCGCCT
CCGTCCGGAAGAAGCGGTCGTGCTGGCCTTCCTACAGCGCCGGCTCGCCGAAAAGGCAAAGATCCCGGCGTTGTAG

Upstream 100 bases:

>100_bases
TGACAGGCGCATAGGAGGATCGAGCCTTGCTCTTGGACAGTGCGAACCAGAGTCCGGCTTGGGTGGGGAACGCGAACCCG
TGCTGGACGCTTCAGCGGTT

Downstream 100 bases:

>100_bases
CGATGCAATGAATGGCGGGACGCTGGCCCGTCTCTCCTGTTACTCGCGCCAATTCTCGGCAGCCCCGCTAGCTCATGGTG
TTGAAGGCCCGCGCCTATGC

Product: putative DNA topoisomerase I

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKTQEDAPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTDEKTLKRIASLAIPPAYTDVW
ICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHMLDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTM
IRIGNADYAKQNKSYGLTTLQDRHVAIDGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVASRLGNTPTVCRKCYIHPEVF
ESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQRRLAEKAKIPAL

Sequences:

>Translated_371_residues
MKTQEDAPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTDEKTLKRIASLAIPPAYTDVW
ICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHMLDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTM
IRIGNADYAKQNKSYGLTTLQDRHVAIDGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVASRLGNTPTVCRKCYIHPEVF
ESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQRRLAEKAKIPAL
>Mature_371_residues
MKTQEDAPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTDEKTLKRIASLAIPPAYTDVW
ICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHMLDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTM
IRIGNADYAKQNKSYGLTTLQDRHVAIDGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVASRLGNTPTVCRKCYIHPEVF
ESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQRRLAEKAKIPAL

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41759; Mature: 41759

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQEDAPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTD
CCCCCCCCCCCCCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEECC
EKTLKRIASLAIPPAYTDVWICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHM
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTMIRIGNADYAKQNKSYGLTTL
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEE
QDRHVAIDGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
CCCEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVA
EEHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLGNTPTVCRKCYIHPEVFESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQR
HHHCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RLAEKAKIPAL
HHHHHCCCCCC
>Mature Secondary Structure
MKTQEDAPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTD
CCCCCCCCCCCCCCCCEEEHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEECC
EKTLKRIASLAIPPAYTDVWICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHM
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTMIRIGNADYAKQNKSYGLTTL
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEE
QDRHVAIDGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
CCCEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVA
EEHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRLGNTPTVCRKCYIHPEVFESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQR
HHHCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RLAEKAKIPAL
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA