Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550715
Identifier: 148550715
GI number: 148550715
Start: 176671
End: 177285
Strand: Direct
Name: 148550715
Synonym: Swit_5279
Alternate gene names: NA
Gene position: 176671-177285 (Clockwise)
Preceding gene: 148550712
Following gene: 148550716
Centisome position: 56.95
GC content: 63.41
Gene sequence:
>615_bases GTGCAGGAATTTCAAGTTGTTCGATCGCCTACAAGGCGACGAGGGCCGAAGGGGACTGACGCTAGAGAGGACTTATCGGG CCTTGAGAAGCTCATCGATCGCCGCCATTTCCGCATCGAATTGGTCGAAGACAGCCGCCAGATTTCGAGATGGCGAGGGG AGGGGTCTCTCCACGCGGGGGCGCCCAAGCGGGACTCTGGCGAAGCCAAACTCGACAGCGAGGTCGACGCTCATGAAAAT GCGCCACGTCCGCCTTGTCGTGATTTCGGTCAGAAGCCCGGTACGGGCGGCGCGCTCCAGCAACCTGCTGGCGCCAGTCA CGGTCAGATCAAGAAGTCGCGCCACAGCCTGTGGCGACAGGACCGGTTGGTGAAGCGTAAGCGCGAGGAGGGAGGGCAGG GCACCGGGACGATAAGACTCCGCGATTGCCGTTCGGGCTTTGCGATGGAGGCGCTCCAGATGGTCAAGGCGTTCAAGGCC ACGCTCGGCGCGCGCGGCAAGGGCCCGCAGGACCGCGAGCCAGTCGGCTTCATTCAGCGTCTTCTTCAAACGGAAGGCTT TGGCGCCGCCGACGAGGTAGGGGAGGGGGCTGCCTGTCAGATCCTGGTCGCGTAA
Upstream 100 bases:
>100_bases TGTGCCGCGCTGGGGCAAGCGTTATCGCTGCATAAAGTACAGCGGAATGTGGTGTGGCGGGGCGTTACAAGGCGCGGCAC ATCGTGCGGCACAATATTAA
Downstream 100 bases:
>100_bases GGCGAACGGCAGACCGAGCCAGGGGTCGAGCCCGCCTCGTACTCGTGCATAGCGCCGGATCTGTTCGAGCGCGCGGACGA GGGGAGGGTGATCCGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MQEFQVVRSPTRRRGPKGTDAREDLSGLEKLIDRRHFRIELVEDSRQISRWRGEGSLHAGAPKRDSGEAKLDSEVDAHEN APRPPCRDFGQKPGTGGALQQPAGASHGQIKKSRHSLWRQDRLVKRKREEGGQGTGTIRLRDCRSGFAMEALQMVKAFKA TLGARGKGPQDREPVGFIQRLLQTEGFGAADEVGEGAACQILVA
Sequences:
>Translated_204_residues MQEFQVVRSPTRRRGPKGTDAREDLSGLEKLIDRRHFRIELVEDSRQISRWRGEGSLHAGAPKRDSGEAKLDSEVDAHEN APRPPCRDFGQKPGTGGALQQPAGASHGQIKKSRHSLWRQDRLVKRKREEGGQGTGTIRLRDCRSGFAMEALQMVKAFKA TLGARGKGPQDREPVGFIQRLLQTEGFGAADEVGEGAACQILVA >Mature_204_residues MQEFQVVRSPTRRRGPKGTDAREDLSGLEKLIDRRHFRIELVEDSRQISRWRGEGSLHAGAPKRDSGEAKLDSEVDAHEN APRPPCRDFGQKPGTGGALQQPAGASHGQIKKSRHSLWRQDRLVKRKREEGGQGTGTIRLRDCRSGFAMEALQMVKAFKA TLGARGKGPQDREPVGFIQRLLQTEGFGAADEVGEGAACQILVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22460; Mature: 22460
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFQVVRSPTRRRGPKGTDAREDLSGLEKLIDRRHFRIELVEDSRQISRWRGEGSLHAG CCCCHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCC APKRDSGEAKLDSEVDAHENAPRPPCRDFGQKPGTGGALQQPAGASHGQIKKSRHSLWRQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DRLVKRKREEGGQGTGTIRLRDCRSGFAMEALQMVKAFKATLGARGKGPQDREPVGFIQR HHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LLQTEGFGAADEVGEGAACQILVA HHHHCCCCCHHHHCCCCEEEEEEC >Mature Secondary Structure MQEFQVVRSPTRRRGPKGTDAREDLSGLEKLIDRRHFRIELVEDSRQISRWRGEGSLHAG CCCCHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCC APKRDSGEAKLDSEVDAHENAPRPPCRDFGQKPGTGGALQQPAGASHGQIKKSRHSLWRQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DRLVKRKREEGGQGTGTIRLRDCRSGFAMEALQMVKAFKATLGARGKGPQDREPVGFIQR HHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LLQTEGFGAADEVGEGAACQILVA HHHHCCCCCHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA