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The map label for this gene is 148550712

Identifier: 148550712

GI number: 148550712

Start: 174080

End: 175195

Strand: Direct

Name: 148550712

Synonym: Swit_5276

Alternate gene names: NA

Gene position: 174080-175195 (Clockwise)

Preceding gene: 148550705

Following gene: 148550715

Centisome position: 56.11

GC content: 61.29

Gene sequence:

>1116_bases
ATGAAGCCCGATTCGGACATCGTTGAGATCGAGGTTTCCCCGGAAGCGGATGGCCTGAGCCGGACGCTGCGGGTCGCTGA
TGTGATTCGCCGCCGCGATCTCGATTTTGTAAGCAAACCGGGCGAGCTCGTCGAATCCGAGTTTGAAACCGGCTCCTTGA
GCGCCGCCGGGCGTAAGGCCTTCGCCCTGATGCTACGCAAGGCTGGGCCAGACGCTGGCGAGGACAGAAACTTCACGATT
ACCAAGAAGGAGCTGCGCGGATCGCACAAGGGCAATGAGCGCATCCAGCCCGTGATGGACGAGCTTTTGCGCGTGATCGT
GCGCATCCGCACGACGACCAAGAAGGGCAAGCCCGCGATCATGTCGCAATCCCTGCTCTCGAGCTGCGTGGAGGAAATCT
CCGAAGACGGCATGAGCGTCGTGGAGTACGAGTTTTCGGAAGCCTTCAAGCGCGTGATGCAGCGCTCGGACTATTATGCG
CGGGTCAACCTGGGCGTCATGCTGGCGCTGCAGTCGCGCTATTCGCTGACGCTCTATGACCTGGGCTGCCTGATCATCAA
CCGGCAGAACCGCGTCGTGAAGATGGAGGTTGAGGAACTGCGCCGGCGTCTGGGCGTGCCGGAGGGTAGCTTCAAGAATT
TCGCGGAATTCCGCCGCGATGTCCTGGCAAAATCGAAGTTGGAGATCGACCAGCTCGCGGATTTCACCGTGGAATGGGAC
GAGATCCGTGGATCGGGGCGTGGACGGCCTGTCGAGGCTGTGAAGCTCACATTCAGTCCTAAGGATCCCGTCGATCAGGA
GGAAACCGCCAAGGAGCTCGATCGGCCGAAAGTGGGTCGGCGTGCCAGGCGGGACGGAACGGTCGAAACCGTCGCACCGC
CGCCCGTCCCCCTGCCCTCGGCGCGCCCCTTCCCTTCGGGATCGCTGAACTTCTGCCCTGACCAACGCATCATCACGATT
TTCCGCGATTTTGGCGGAGGCTGGGACAAGGACATGATTGCCGATGCCTACAGGCAGAAAATGGGCGCAAAGCTGGAGAC
CCTGACGGGCGCCGCTCTCTACAAATCGTGGGAAGGCTTCTGCAAAAGCTGGGTCGCGATGCGCGGGACGCCCTGA

Upstream 100 bases:

>100_bases
TTGCGCCCTTGTCAGCCTTTATGTGAGGGCTCGGGGGCACGTCTATGTGAGTGAACGGGGGGATGTTCTCTTTATGACAA
GGTGATGATATGCAACTCAC

Downstream 100 bases:

>100_bases
AGTCCCCTCCCCCCGTTCCTCACATAAAGAGCCGGGGCCCTACTCCCCGCTACCCCCCTGCCCTTCCGCGAGATCGATCA
GCGCCATGATGCCGTCGGGC

Product: initiator RepB protein

Products: NA

Alternate protein names: Replication Initiator Protein; Replication Protein; Replication Initiator RepA; Replicase

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKPDSDIVEIEVSPEADGLSRTLRVADVIRRRDLDFVSKPGELVESEFETGSLSAAGRKAFALMLRKAGPDAGEDRNFTI
TKKELRGSHKGNERIQPVMDELLRVIVRIRTTTKKGKPAIMSQSLLSSCVEEISEDGMSVVEYEFSEAFKRVMQRSDYYA
RVNLGVMLALQSRYSLTLYDLGCLIINRQNRVVKMEVEELRRRLGVPEGSFKNFAEFRRDVLAKSKLEIDQLADFTVEWD
EIRGSGRGRPVEAVKLTFSPKDPVDQEETAKELDRPKVGRRARRDGTVETVAPPPVPLPSARPFPSGSLNFCPDQRIITI
FRDFGGGWDKDMIADAYRQKMGAKLETLTGAALYKSWEGFCKSWVAMRGTP

Sequences:

>Translated_371_residues
MKPDSDIVEIEVSPEADGLSRTLRVADVIRRRDLDFVSKPGELVESEFETGSLSAAGRKAFALMLRKAGPDAGEDRNFTI
TKKELRGSHKGNERIQPVMDELLRVIVRIRTTTKKGKPAIMSQSLLSSCVEEISEDGMSVVEYEFSEAFKRVMQRSDYYA
RVNLGVMLALQSRYSLTLYDLGCLIINRQNRVVKMEVEELRRRLGVPEGSFKNFAEFRRDVLAKSKLEIDQLADFTVEWD
EIRGSGRGRPVEAVKLTFSPKDPVDQEETAKELDRPKVGRRARRDGTVETVAPPPVPLPSARPFPSGSLNFCPDQRIITI
FRDFGGGWDKDMIADAYRQKMGAKLETLTGAALYKSWEGFCKSWVAMRGTP
>Mature_371_residues
MKPDSDIVEIEVSPEADGLSRTLRVADVIRRRDLDFVSKPGELVESEFETGSLSAAGRKAFALMLRKAGPDAGEDRNFTI
TKKELRGSHKGNERIQPVMDELLRVIVRIRTTTKKGKPAIMSQSLLSSCVEEISEDGMSVVEYEFSEAFKRVMQRSDYYA
RVNLGVMLALQSRYSLTLYDLGCLIINRQNRVVKMEVEELRRRLGVPEGSFKNFAEFRRDVLAKSKLEIDQLADFTVEWD
EIRGSGRGRPVEAVKLTFSPKDPVDQEETAKELDRPKVGRRARRDGTVETVAPPPVPLPSARPFPSGSLNFCPDQRIITI
FRDFGGGWDKDMIADAYRQKMGAKLETLTGAALYKSWEGFCKSWVAMRGTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41776; Mature: 41776

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDSDIVEIEVSPEADGLSRTLRVADVIRRRDLDFVSKPGELVESEFETGSLSAAGRKA
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCHHHHHH
FALMLRKAGPDAGEDRNFTITKKELRGSHKGNERIQPVMDELLRVIVRIRTTTKKGKPAI
HHHHHHHCCCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
MSQSLLSSCVEEISEDGMSVVEYEFSEAFKRVMQRSDYYARVNLGVMLALQSRYSLTLYD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCEEEEEE
LGCLIINRQNRVVKMEVEELRRRLGVPEGSFKNFAEFRRDVLAKSKLEIDQLADFTVEWD
EEEEEECCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCEEEHH
EIRGSGRGRPVEAVKLTFSPKDPVDQEETAKELDRPKVGRRARRDGTVETVAPPPVPLPS
HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCC
ARPFPSGSLNFCPDQRIITIFRDFGGGWDKDMIADAYRQKMGAKLETLTGAALYKSWEGF
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
CKSWVAMRGTP
HHHHHHCCCCC
>Mature Secondary Structure
MKPDSDIVEIEVSPEADGLSRTLRVADVIRRRDLDFVSKPGELVESEFETGSLSAAGRKA
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCCCHHHHHH
FALMLRKAGPDAGEDRNFTITKKELRGSHKGNERIQPVMDELLRVIVRIRTTTKKGKPAI
HHHHHHHCCCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
MSQSLLSSCVEEISEDGMSVVEYEFSEAFKRVMQRSDYYARVNLGVMLALQSRYSLTLYD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCEEEEEE
LGCLIINRQNRVVKMEVEELRRRLGVPEGSFKNFAEFRRDVLAKSKLEIDQLADFTVEWD
EEEEEECCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCEEEHH
EIRGSGRGRPVEAVKLTFSPKDPVDQEETAKELDRPKVGRRARRDGTVETVAPPPVPLPS
HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCC
ARPFPSGSLNFCPDQRIITIFRDFGGGWDKDMIADAYRQKMGAKLETLTGAALYKSWEGF
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
CKSWVAMRGTP
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA