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The map label for this gene is 148550694

Identifier: 148550694

GI number: 148550694

Start: 148271

End: 148783

Strand: Reverse

Name: 148550694

Synonym: Swit_5258

Alternate gene names: NA

Gene position: 148783-148271 (Counterclockwise)

Preceding gene: 148550695

Following gene: 148550693

Centisome position: 47.96

GC content: 69.59

Gene sequence:

>513_bases
ATGATGGCGCGCAAGGTCATGCTCGCTGGCCTTTGTGCAGCCCTGCTTATGGGTTCCAGCCCGCCGGGCGCCCAGAGCTT
CCATGCCCGCGGCCGCGCGCTCGACGGCGATACAATCGCCGTCGATATCCGCCTGCTCGGGATCGATGCCTTCGAGACAA
GGCAGATGTGCGAGCGCCGGAACGGCTGCTGGCCATGCGGCAAGGCCGCGCAGGATCTCGCAGCGCGGGCTCTGCGCGAT
GCCGAGCCGGTCATCACGCTGACGCCCTCGTCGACCTATGGCCGTCCCGTCGCCACCGTGACCGTTCGCGGCTCCGATCT
TGGCGAGACGCTGCTCCGCGCCGGGCTTGCAATCCCGCAATCGCAGTATCTTCGCCGCGATCCCGCCCGCCGCGCGCGCT
ATGAAGCGGCTTTCGCCGACGCCCAAGGCCGCAGGGCAGGGGCCTTTGACGGCACCTGGCTGCCCCCCGCACGCTGGCGC
AAAGGCGAACGCCTCGCCTGCGAGCGCCGATAA

Upstream 100 bases:

>100_bases
GCGGGCCAATCAGCGTCGTGCGCACCGGCGATCTTCTCCAGCCCTACCGGGTGGCCCTGGTCCCGGCCCGCTATGAGCAG
GTCGAGACGGTCATGGTATC

Downstream 100 bases:

>100_bases
TCCCTTTTCCGCAAGACCTCGGCGCTTGAAGCGCGTGGACACCCCCGACAGCACCGGGTCGAGCCGATGTCGTCCGCGGG
CATTGCTGATGAGGCTGGTC

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MMARKVMLAGLCAALLMGSSPPGAQSFHARGRALDGDTIAVDIRLLGIDAFETRQMCERRNGCWPCGKAAQDLAARALRD
AEPVITLTPSSTYGRPVATVTVRGSDLGETLLRAGLAIPQSQYLRRDPARRARYEAAFADAQGRRAGAFDGTWLPPARWR
KGERLACERR

Sequences:

>Translated_170_residues
MMARKVMLAGLCAALLMGSSPPGAQSFHARGRALDGDTIAVDIRLLGIDAFETRQMCERRNGCWPCGKAAQDLAARALRD
AEPVITLTPSSTYGRPVATVTVRGSDLGETLLRAGLAIPQSQYLRRDPARRARYEAAFADAQGRRAGAFDGTWLPPARWR
KGERLACERR
>Mature_170_residues
MMARKVMLAGLCAALLMGSSPPGAQSFHARGRALDGDTIAVDIRLLGIDAFETRQMCERRNGCWPCGKAAQDLAARALRD
AEPVITLTPSSTYGRPVATVTVRGSDLGETLLRAGLAIPQSQYLRRDPARRARYEAAFADAQGRRAGAFDGTWLPPARWR
KGERLACERR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18513; Mature: 18513

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMARKVMLAGLCAALLMGSSPPGAQSFHARGRALDGDTIAVDIRLLGIDAFETRQMCERR
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHC
NGCWPCGKAAQDLAARALRDAEPVITLTPSSTYGRPVATVTVRGSDLGETLLRAGLAIPQ
CCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCH
SQYLRRDPARRARYEAAFADAQGRRAGAFDGTWLPPARWRKGERLACERR
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MMARKVMLAGLCAALLMGSSPPGAQSFHARGRALDGDTIAVDIRLLGIDAFETRQMCERR
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHHHHC
NGCWPCGKAAQDLAARALRDAEPVITLTPSSTYGRPVATVTVRGSDLGETLLRAGLAIPQ
CCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCH
SQYLRRDPARRARYEAAFADAQGRRAGAFDGTWLPPARWRKGERLACERR
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA