Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550693
Identifier: 148550693
GI number: 148550693
Start: 147126
End: 148154
Strand: Reverse
Name: 148550693
Synonym: Swit_5257
Alternate gene names: NA
Gene position: 148154-147126 (Counterclockwise)
Preceding gene: 148550694
Following gene: 148550690
Centisome position: 47.76
GC content: 66.76
Gene sequence:
>1029_bases ATGATGACGTCCTCGTCCCAATCGCGCGCGATCATGCTGATGGTCGGGCTGCCGCATCTTCGCTCCGGCCCGTTGCTCGC CCGCGCGCGCAATCTTGCCCTGCCGGTCCTCGTCTCGGCCAATGCCTTCTCCCGCTGGGTGGACGCCGGGCAGGGACGTG AATGGGCCGGCTGGAAACTCCAGGACCTGGAGAATGCGGCCAGTCTCCACAGTCTTTGCCTGGACAGCGCCGGGTTCAGC GCCATGGCCCACTATGGCGGCTATCCCTGGACCATCGACGCCTATGTCGCGCTCGCGTCCGCCTTTCCCTTTCGCTGGTG GGCAAGCCTCGACTATTGCGTGGAGCAGGAGGTTGCCCGCGACCGCGAGGAGGTCCTCGACCGGATCGCGCGCACCGTCC GGGCCAATATTGAATGCCATGCGCGCGCTGTCGATCGGAATATCGCCAGCACATTCCTGCCGGTCATCCAGGGCCGCCTG CCGCAAGATTACGAACGCTGCGCCACTGCGCTCGCGGGGCTTGTCGAGCGCCATCCCCTCATCGGTGTCGGATCGATGTG CCGACGACCCATCCATGGCGACGCCGGTCTTATTGCGGTGGTCGATCATCTCGATCGCGTCCTGCCGCCAGCGGTGCGGT TGCATCTCTTCGGCGTCAAGGGCGCGGCCATTCCCTTCCTCAAACCCTTCGCGCGCCGCGTCGCCTCGATCGACAGTCAG GCCTATGGCATCGCAGCGCGCAGCAAGGCGCGGGTGCATGGTTGTCGAAAGTCGGATGACCTCGTCGCCGACGAGATGGA GCGGTGGGTCGAGCAGCAGCGGGCGCGGCTACGCCAGCCTGCCCGCCCCCTGCCGATCGCGGCGCCTGCGACAGCGCCGC CGCTGCGGTTCGATCCCTGGGAAGAGGCGATCGCTAAGGCGCGGGAAGACCTGCGGGCGCTCATCGAAAGCGGCGACCTC GATCATGATGCGCTTGTGACCGGATGGGTCGAGCAATGGGCCGCAGACCTGCTGCACGCCGAGCCTTGA
Upstream 100 bases:
>100_bases CCTCGGCGCTTGAAGCGCGTGGACACCCCCGACAGCACCGGGTCGAGCCGATGTCGTCCGCGGGCATTGCTGATGAGGCT GGTCTCCAAGGACATGTCGC
Downstream 100 bases:
>100_bases GGGCGATCACCAGGCACGGCGCCCCACGCGGCACGGCCCTGCAGTTCAGGATTTGACGACCGGCTCCGCCCACCAGGACG CACCCTGGACGAAATCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MMTSSSQSRAIMLMVGLPHLRSGPLLARARNLALPVLVSANAFSRWVDAGQGREWAGWKLQDLENAASLHSLCLDSAGFS AMAHYGGYPWTIDAYVALASAFPFRWWASLDYCVEQEVARDREEVLDRIARTVRANIECHARAVDRNIASTFLPVIQGRL PQDYERCATALAGLVERHPLIGVGSMCRRPIHGDAGLIAVVDHLDRVLPPAVRLHLFGVKGAAIPFLKPFARRVASIDSQ AYGIAARSKARVHGCRKSDDLVADEMERWVEQQRARLRQPARPLPIAAPATAPPLRFDPWEEAIAKAREDLRALIESGDL DHDALVTGWVEQWAADLLHAEP
Sequences:
>Translated_342_residues MMTSSSQSRAIMLMVGLPHLRSGPLLARARNLALPVLVSANAFSRWVDAGQGREWAGWKLQDLENAASLHSLCLDSAGFS AMAHYGGYPWTIDAYVALASAFPFRWWASLDYCVEQEVARDREEVLDRIARTVRANIECHARAVDRNIASTFLPVIQGRL PQDYERCATALAGLVERHPLIGVGSMCRRPIHGDAGLIAVVDHLDRVLPPAVRLHLFGVKGAAIPFLKPFARRVASIDSQ AYGIAARSKARVHGCRKSDDLVADEMERWVEQQRARLRQPARPLPIAAPATAPPLRFDPWEEAIAKAREDLRALIESGDL DHDALVTGWVEQWAADLLHAEP >Mature_342_residues MMTSSSQSRAIMLMVGLPHLRSGPLLARARNLALPVLVSANAFSRWVDAGQGREWAGWKLQDLENAASLHSLCLDSAGFS AMAHYGGYPWTIDAYVALASAFPFRWWASLDYCVEQEVARDREEVLDRIARTVRANIECHARAVDRNIASTFLPVIQGRL PQDYERCATALAGLVERHPLIGVGSMCRRPIHGDAGLIAVVDHLDRVLPPAVRLHLFGVKGAAIPFLKPFARRVASIDSQ AYGIAARSKARVHGCRKSDDLVADEMERWVEQQRARLRQPARPLPIAAPATAPPLRFDPWEEAIAKAREDLRALIESGDL DHDALVTGWVEQWAADLLHAEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37806; Mature: 37806
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSSSQSRAIMLMVGLPHLRSGPLLARARNLALPVLVSANAFSRWVDAGQGREWAGWKL CCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCH QDLENAASLHSLCLDSAGFSAMAHYGGYPWTIDAYVALASAFPFRWWASLDYCVEQEVAR HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DREEVLDRIARTVRANIECHARAVDRNIASTFLPVIQGRLPQDYERCATALAGLVERHPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC IGVGSMCRRPIHGDAGLIAVVDHLDRVLPPAVRLHLFGVKGAAIPFLKPFARRVASIDSQ CCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHCCCH AYGIAARSKARVHGCRKSDDLVADEMERWVEQQRARLRQPARPLPIAAPATAPPLRFDPW HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EEAIAKAREDLRALIESGDLDHDALVTGWVEQWAADLLHAEP HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMTSSSQSRAIMLMVGLPHLRSGPLLARARNLALPVLVSANAFSRWVDAGQGREWAGWKL CCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCH QDLENAASLHSLCLDSAGFSAMAHYGGYPWTIDAYVALASAFPFRWWASLDYCVEQEVAR HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DREEVLDRIARTVRANIECHARAVDRNIASTFLPVIQGRLPQDYERCATALAGLVERHPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC IGVGSMCRRPIHGDAGLIAVVDHLDRVLPPAVRLHLFGVKGAAIPFLKPFARRVASIDSQ CCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHCCCH AYGIAARSKARVHGCRKSDDLVADEMERWVEQQRARLRQPARPLPIAAPATAPPLRFDPW HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH EEAIAKAREDLRALIESGDLDHDALVTGWVEQWAADLLHAEP HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA