Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550659
Identifier: 148550659
GI number: 148550659
Start: 112608
End: 113180
Strand: Reverse
Name: 148550659
Synonym: Swit_5222
Alternate gene names: NA
Gene position: 113180-112608 (Counterclockwise)
Preceding gene: 148550660
Following gene: 148550658
Centisome position: 36.48
GC content: 62.83
Gene sequence:
>573_bases ATGGGTCTCGCGGATCGCGATTATATGCGCGCGCGCAGGCGGCGTGGCCAACTCACGCCCGAACCGCGCGTCGTCGTCCA TCCCATGCAGAAGTGGATCATGCTGCTGTCGGCCGTGACGTTTCTTTATCCCGCCTACCGGGAGGCGAAACGCTCCGGCT GGCTTTCCGATGCAGGACCGTCCCTGCTGTTTCCCGCGACGGGAAGCGTAACCGTGGCTCGAGGCATCGAGCGCAAGGAC GCGACCTCAAAGCTACGGGTGAGCACGGCTGATGCCAACGCCGTGGTGCAGCTCTTCGAGCGTGCGAGCGATCGTCATGT GATCTCGGTCTATGTCCGTCGTGAGGATCATGCGGAGGTCCCGGTGCCGCCTGGCACCTACCGCATGGGGATCATTGAGG GCGACAAATGGCATGGGCGTGGAAGATTCTTCGGACCTTCGACCACCTACGAGACCGTCGTCAAACCCATGACCTTCACC GCCACCACCTCAAACGGGATCGATCTGCATCGGCGTCCGGGCGGAAAGCTTCACACGCGCGTGAACCTCACCGATCCACC GGCGCTCGACTGA
Upstream 100 bases:
>100_bases ACGGCGAGAGCGTCGAGCTCGAAATCCGGCGTTCCGCGCTCGATGGGCGCACGCTGCGCGATGGCGGCGAAGGCCGCCGC GACGGCTGGAATTGACGGCT
Downstream 100 bases:
>100_bases GAAAGGACAAAGCATGGACATTGGCGAAATCCTGCTGTCTCCGAAAGGTCGAGTGGGCCGCGCCCCGTTCCTGGCGGTTG TGGCCACAGGTTGGGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGLADRDYMRARRRRGQLTPEPRVVVHPMQKWIMLLSAVTFLYPAYREAKRSGWLSDAGPSLLFPATGSVTVARGIERKD ATSKLRVSTADANAVVQLFERASDRHVISVYVRREDHAEVPVPPGTYRMGIIEGDKWHGRGRFFGPSTTYETVVKPMTFT ATTSNGIDLHRRPGGKLHTRVNLTDPPALD
Sequences:
>Translated_190_residues MGLADRDYMRARRRRGQLTPEPRVVVHPMQKWIMLLSAVTFLYPAYREAKRSGWLSDAGPSLLFPATGSVTVARGIERKD ATSKLRVSTADANAVVQLFERASDRHVISVYVRREDHAEVPVPPGTYRMGIIEGDKWHGRGRFFGPSTTYETVVKPMTFT ATTSNGIDLHRRPGGKLHTRVNLTDPPALD >Mature_189_residues GLADRDYMRARRRRGQLTPEPRVVVHPMQKWIMLLSAVTFLYPAYREAKRSGWLSDAGPSLLFPATGSVTVARGIERKDA TSKLRVSTADANAVVQLFERASDRHVISVYVRREDHAEVPVPPGTYRMGIIEGDKWHGRGRFFGPSTTYETVVKPMTFTA TTSNGIDLHRRPGGKLHTRVNLTDPPALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21285; Mature: 21153
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLADRDYMRARRRRGQLTPEPRVVVHPMQKWIMLLSAVTFLYPAYREAKRSGWLSDAGP CCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SLLFPATGSVTVARGIERKDATSKLRVSTADANAVVQLFERASDRHVISVYVRREDHAEV CEEECCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCC PVPPGTYRMGIIEGDKWHGRGRFFGPSTTYETVVKPMTFTATTSNGIDLHRRPGGKLHTR CCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHCCEEEEEECCCCCEEEECCCCCEEEE VNLTDPPALD EECCCCCCCC >Mature Secondary Structure GLADRDYMRARRRRGQLTPEPRVVVHPMQKWIMLLSAVTFLYPAYREAKRSGWLSDAGP CCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SLLFPATGSVTVARGIERKDATSKLRVSTADANAVVQLFERASDRHVISVYVRREDHAEV CEEECCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEECCCCCCC PVPPGTYRMGIIEGDKWHGRGRFFGPSTTYETVVKPMTFTATTSNGIDLHRRPGGKLHTR CCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHCCEEEEEECCCCCEEEECCCCCEEEE VNLTDPPALD EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA