Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550658
Identifier: 148550658
GI number: 148550658
Start: 112193
End: 112594
Strand: Reverse
Name: 148550658
Synonym: Swit_5221
Alternate gene names: NA
Gene position: 112594-112193 (Counterclockwise)
Preceding gene: 148550659
Following gene: 148550656
Centisome position: 36.29
GC content: 62.69
Gene sequence:
>402_bases ATGGACATTGGCGAAATCCTGCTGTCTCCGAAAGGTCGAGTGGGCCGCGCCCCGTTCCTGGCGGTTGTGGCCACAGGTTG GGCGATCGCGTTCGATCTCCTGCCTTTCAACCCGCTGCTCGCGCTACGCTATGCCGCCACCATCAATGTCGCGGTCGTCG TCATTAGCGCGCTGGCGGTCTGGGTGGGGATCGCCATTACGGTCAAGCGTTTCCACGACGTTGGATTATCGGGGTTCAAT ACGGTCGGATTGGTCTGGGCGACGCTGCGCGGCGACCCGCTGGCGATCGACGCGCCTTTGGCCATGGCCATCGCGGCCTT TGGGATCATCACCCAGCTATGGCTTTGCATAGAGCCGGGCTCGCGGAGCGCCAATCGCTTCGGCAATCCCGTGTCGGCTT AA
Upstream 100 bases:
>100_bases ACCTCAAACGGGATCGATCTGCATCGGCGTCCGGGCGGAAAGCTTCACACGCGCGTGAACCTCACCGATCCACCGGCGCT CGACTGAGAAAGGACAAAGC
Downstream 100 bases:
>100_bases CGGGCACATCCCTTGCCCTCGACCCGCAAGTCGACATAGGCCCGGCCGTTCCATCGCACGACCGGCATGCAAAGGCCGGG GCCGCCGATGCCGATATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MDIGEILLSPKGRVGRAPFLAVVATGWAIAFDLLPFNPLLALRYAATINVAVVVISALAVWVGIAITVKRFHDVGLSGFN TVGLVWATLRGDPLAIDAPLAMAIAAFGIITQLWLCIEPGSRSANRFGNPVSA
Sequences:
>Translated_133_residues MDIGEILLSPKGRVGRAPFLAVVATGWAIAFDLLPFNPLLALRYAATINVAVVVISALAVWVGIAITVKRFHDVGLSGFN TVGLVWATLRGDPLAIDAPLAMAIAAFGIITQLWLCIEPGSRSANRFGNPVSA >Mature_133_residues MDIGEILLSPKGRVGRAPFLAVVATGWAIAFDLLPFNPLLALRYAATINVAVVVISALAVWVGIAITVKRFHDVGLSGFN TVGLVWATLRGDPLAIDAPLAMAIAAFGIITQLWLCIEPGSRSANRFGNPVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13981; Mature: 13981
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGEILLSPKGRVGRAPFLAVVATGWAIAFDLLPFNPLLALRYAATINVAVVVISALAV CCHHHEEECCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH WVGIAITVKRFHDVGLSGFNTVGLVWATLRGDPLAIDAPLAMAIAAFGIITQLWLCIEPG HHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHEECCC SRSANRFGNPVSA CCCHHHCCCCCCC >Mature Secondary Structure MDIGEILLSPKGRVGRAPFLAVVATGWAIAFDLLPFNPLLALRYAATINVAVVVISALAV CCHHHEEECCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH WVGIAITVKRFHDVGLSGFNTVGLVWATLRGDPLAIDAPLAMAIAAFGIITQLWLCIEPG HHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHEECCC SRSANRFGNPVSA CCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA