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The map label for this gene is 148550656

Identifier: 148550656

GI number: 148550656

Start: 109320

End: 110858

Strand: Reverse

Name: 148550656

Synonym: Swit_5219

Alternate gene names: NA

Gene position: 110858-109320 (Counterclockwise)

Preceding gene: 148550658

Following gene: 148550655

Centisome position: 35.73

GC content: 65.3

Gene sequence:

>1539_bases
ATGGTACAAACGAACATCTCCAGGGTCCCTAGCACGTCCGGCCGAAATTGGAGCGAGGACGAGCGCGTTGCCGCGTTGGA
CCGCTATGACATTCTTGATACGCCAACCGAGCCGATCTTTGACGACATCGCCCGTCTGGCCTCCGAGGCGCTTGGGGCGC
CGATCGCCGTGGTCAACCTTATCGCGACCGCGCGGCAGTGGTTCAAAGCCGAAATCAGCATCGGCGCGCGCGAACTCCCT
CTGGAAGTCTCGATCTGCGCGCATGCGCTGCTCGAGGAGGACATGATGGTGATCCCCGACACACGGCTCGATCCGCGGGT
CGATTGCAATCCCCTGGTTACGGCCGAAGGTGGTCTTCGCTTCTATGCCGGGGCGCTTCTCAAGACACCCGACGGTCTGC
CCATCGGCACGCTGTGCGTTCTTGATCGGCAGCCTCGCCCGGAGGGCATCACGCCCTTCCAGCGGCTCACCCTCGAAGTG
CTGGCGCGCCAGGTCATGACGCAGCTGGAATTGCGCAGGTCGCTCAGCCAGCAGCAAGAAACGCTCGCGCAGCTCGCTGC
GAGCGAGGAGCGGACCCGCCTTGCCCTTGACGCAGGCGAACTCGGCGCCTGGGAATCGACCCCGGCGCTGCGTTCGCTCA
AATGGGACGCGCGCACCCGGGAGTTGCTTGGCCACGAACCTGACGAAGCGCTCGACTATGAAACCTCGTTTCTCGCGCGG
GTTCATGCCGAGGATCGCGAGCGGGTCGCTGCCCTTATCGCCGAGGCGCTGGCCCCTGGGGGCGCAGGCACGGTCAGCGT
CGAATATCGCACGGTCAATCCTCGTGATGGCCGTGAGCGCTGGATCCACGCCAAGGGCGCGCTTGCCGTAGGTCTGGGCG
GCGAACAGAAGTTCGTCGGCACGGTGCGGGACATCACCGCGGAAAAGGATGCCGAGATGCATCGGCGGCTGCTGACTGGC
GAGCTCCAGCACCGGGTCAAGAATACGCTCGCCGTGGTAAATGCCATCGTCCACCAGTCGCTCCGCAGCGCGCCCTCGAT
GGAGGAGGCGAGTACCGCGATCGGGCAGCGCCTCCAGACCCTGGGCGCCGCTTACGAGTTGCTAACCCGCACCGACTGGA
CGGTGGCGCCGATCGGCGCTGTCGCCGAAGGAACAACGGCGCTTCATGGCGCTCGCACAGGCGCGATCCGGATTGCGGGG
CCTGACCTTCTTCTATCGGCACGGGCCTCGCTGGCTCTGTCCATGTCCCTCCACGAGCTGTCCACCAATGCGGTGAAATA
TGGCGCCCTGTCGGTGCCGGGCGGGCAGGTCGACCTTACCTGGACCATCGATGCGGAAGAGGGAAAGTCATTCCTCACGA
TCTGCTGGGAGGAGCGAGGCGGACCAACCGTATGCGCGCCCGAGCGAGGCGGGTTCGGCACCCGCTTGATGGCCAGCCTT
GCCAGCGATCTCGGCGGCAAGGGAGTCATCGACTATCAGCCGACCGGTGTCGTCTGGCGGCATCGGGCTGATCTGGCACG
GATCACCGAACCCGCTTGA

Upstream 100 bases:

>100_bases
GTGCGCGGATGTTGGCTATTAAGCTTTATGGCTTTCTCTGAAATGCACTGGCTGCGGCGAATTGCCGCACTTTACCGCCT
AAAGCTGCTACTCAGTCGGG

Downstream 100 bases:

>100_bases
GTGGAACCCACGGCGGTTCCGGCTCGGTAAAATGTCACGGGTGGAAAAACTTGGATGTGCTGTCCGCTGGGGATTCACAT
TGCGCGCGCGCGTGATAGAT

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MVQTNISRVPSTSGRNWSEDERVAALDRYDILDTPTEPIFDDIARLASEALGAPIAVVNLIATARQWFKAEISIGARELP
LEVSICAHALLEEDMMVIPDTRLDPRVDCNPLVTAEGGLRFYAGALLKTPDGLPIGTLCVLDRQPRPEGITPFQRLTLEV
LARQVMTQLELRRSLSQQQETLAQLAASEERTRLALDAGELGAWESTPALRSLKWDARTRELLGHEPDEALDYETSFLAR
VHAEDRERVAALIAEALAPGGAGTVSVEYRTVNPRDGRERWIHAKGALAVGLGGEQKFVGTVRDITAEKDAEMHRRLLTG
ELQHRVKNTLAVVNAIVHQSLRSAPSMEEASTAIGQRLQTLGAAYELLTRTDWTVAPIGAVAEGTTALHGARTGAIRIAG
PDLLLSARASLALSMSLHELSTNAVKYGALSVPGGQVDLTWTIDAEEGKSFLTICWEERGGPTVCAPERGGFGTRLMASL
ASDLGGKGVIDYQPTGVVWRHRADLARITEPA

Sequences:

>Translated_512_residues
MVQTNISRVPSTSGRNWSEDERVAALDRYDILDTPTEPIFDDIARLASEALGAPIAVVNLIATARQWFKAEISIGARELP
LEVSICAHALLEEDMMVIPDTRLDPRVDCNPLVTAEGGLRFYAGALLKTPDGLPIGTLCVLDRQPRPEGITPFQRLTLEV
LARQVMTQLELRRSLSQQQETLAQLAASEERTRLALDAGELGAWESTPALRSLKWDARTRELLGHEPDEALDYETSFLAR
VHAEDRERVAALIAEALAPGGAGTVSVEYRTVNPRDGRERWIHAKGALAVGLGGEQKFVGTVRDITAEKDAEMHRRLLTG
ELQHRVKNTLAVVNAIVHQSLRSAPSMEEASTAIGQRLQTLGAAYELLTRTDWTVAPIGAVAEGTTALHGARTGAIRIAG
PDLLLSARASLALSMSLHELSTNAVKYGALSVPGGQVDLTWTIDAEEGKSFLTICWEERGGPTVCAPERGGFGTRLMASL
ASDLGGKGVIDYQPTGVVWRHRADLARITEPA
>Mature_512_residues
MVQTNISRVPSTSGRNWSEDERVAALDRYDILDTPTEPIFDDIARLASEALGAPIAVVNLIATARQWFKAEISIGARELP
LEVSICAHALLEEDMMVIPDTRLDPRVDCNPLVTAEGGLRFYAGALLKTPDGLPIGTLCVLDRQPRPEGITPFQRLTLEV
LARQVMTQLELRRSLSQQQETLAQLAASEERTRLALDAGELGAWESTPALRSLKWDARTRELLGHEPDEALDYETSFLAR
VHAEDRERVAALIAEALAPGGAGTVSVEYRTVNPRDGRERWIHAKGALAVGLGGEQKFVGTVRDITAEKDAEMHRRLLTG
ELQHRVKNTLAVVNAIVHQSLRSAPSMEEASTAIGQRLQTLGAAYELLTRTDWTVAPIGAVAEGTTALHGARTGAIRIAG
PDLLLSARASLALSMSLHELSTNAVKYGALSVPGGQVDLTWTIDAEEGKSFLTICWEERGGPTVCAPERGGFGTRLMASL
ASDLGGKGVIDYQPTGVVWRHRADLARITEPA

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55468; Mature: 55468

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTNISRVPSTSGRNWSEDERVAALDRYDILDTPTEPIFDDIARLASEALGAPIAVVNL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
IATARQWFKAEISIGARELPLEVSICAHALLEEDMMVIPDTRLDPRVDCNPLVTAEGGLR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEECCCCCE
FYAGALLKTPDGLPIGTLCVLDRQPRPEGITPFQRLTLEVLARQVMTQLELRRSLSQQQE
EHHHHHEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAQLAASEERTRLALDAGELGAWESTPALRSLKWDARTRELLGHEPDEALDYETSFLAR
HHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHCHHHHHHHH
VHAEDRERVAALIAEALAPGGAGTVSVEYRTVNPRDGRERWIHAKGALAVGLGGEQKFVG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEEEECCCEEEECCCCHHHHH
TVRDITAEKDAEMHRRLLTGELQHRVKNTLAVVNAIVHQSLRSAPSMEEASTAIGQRLQT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGAAYELLTRTDWTVAPIGAVAEGTTALHGARTGAIRIAGPDLLLSARASLALSMSLHEL
HHHHHHHHHCCCCCEECCCHHHCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
STNAVKYGALSVPGGQVDLTWTIDAEEGKSFLTICWEERGGPTVCAPERGGFGTRLMASL
HCCCEEECEEECCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHH
ASDLGGKGVIDYQPTGVVWRHRADLARITEPA
HHHCCCCCEEEECCCCCEEECCCCHHHCCCCC
>Mature Secondary Structure
MVQTNISRVPSTSGRNWSEDERVAALDRYDILDTPTEPIFDDIARLASEALGAPIAVVNL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
IATARQWFKAEISIGARELPLEVSICAHALLEEDMMVIPDTRLDPRVDCNPLVTAEGGLR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEECCCCCE
FYAGALLKTPDGLPIGTLCVLDRQPRPEGITPFQRLTLEVLARQVMTQLELRRSLSQQQE
EHHHHHEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAQLAASEERTRLALDAGELGAWESTPALRSLKWDARTRELLGHEPDEALDYETSFLAR
HHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHCHHHHHHHH
VHAEDRERVAALIAEALAPGGAGTVSVEYRTVNPRDGRERWIHAKGALAVGLGGEQKFVG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHEEEECCCEEEECCCCHHHHH
TVRDITAEKDAEMHRRLLTGELQHRVKNTLAVVNAIVHQSLRSAPSMEEASTAIGQRLQT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGAAYELLTRTDWTVAPIGAVAEGTTALHGARTGAIRIAGPDLLLSARASLALSMSLHEL
HHHHHHHHHCCCCCEECCCHHHCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
STNAVKYGALSVPGGQVDLTWTIDAEEGKSFLTICWEERGGPTVCAPERGGFGTRLMASL
HCCCEEECEEECCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHH
ASDLGGKGVIDYQPTGVVWRHRADLARITEPA
HHHCCCCCEEEECCCCCEEECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA