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The map label for this gene is fnr [C]

Identifier: 148550643

GI number: 148550643

Start: 94424

End: 95209

Strand: Direct

Name: fnr [C]

Synonym: Swit_5204

Alternate gene names: 148550643

Gene position: 94424-95209 (Clockwise)

Preceding gene: 148550638

Following gene: 148550645

Centisome position: 30.44

GC content: 60.69

Gene sequence:

>786_bases
GTGCGAGCCGGTTTGCGCTGGCGCAAACTCGGCTCTGTTATTTCGACTAGATCGACCCGAACGAGAGAAGGCAGGAGGCA
AATCATCGTTCAGACCCGAGGCCTTGCTTCACACCTGAAGATTATCGGCGCGGTGGAGCTATTTCGCGATCTGCCTCACG
AAGCGCTGGTGCATGCCCATGCCTGCGCACGCATCGAACGATTGCCAAAACATGCGAGGATTTTCGAGCAAGGAGCCCGT
GCCGAGCGGGCCTATGCGGTGGCGAAGGGCAGCGTGAGAATCATCCAGACCGGCAGTGATGGCGGGCAGGCGATCATTCG
CTTTATCGGCTCCGGCGAAATGTTCGGAACAGTGCCTCTCTTCACTGACCACCTTCTTCCGGCGGACGCGATCACAGCGG
AGGCGTCGGTCGTCCTCAGTTGGAGCGAGGCGGATATAGTAGTGCTGATCGGCATATATCCGCAGGTGTCGCTGAACGTC
ATTCGAGTGATCGGGACGCGGCTTATCGAACTTCAGGATCGGGTCCGCGAGTTGGCCACCCAGCGCGCCGATCAGCGTCT
CGCCCGTGCGCTCCTGCGCCTGATCCGTAACGATGGTGGCGACGAGGTAGCGTTCCCGCTACGTCGTAAGGACCTGGCGG
AGTTCTCGGGAACGACCCTTCACACTGCGAGCCGAATGCTCTCCGCCTGGGCCAGGGCCGGCCTGCTCACAAGTATCGGA
CGACGCATCCTAATCCATGATCGTACTGCTCTGGACTCCCTCGCAGAGGGCAGGCCACTCCTCTAG

Upstream 100 bases:

>100_bases
GGCTGGCGCCGTCGCTTTGACCAACGTCATGGTTTGGGGAGACAATGCTTTGGTCACGACGATCCTCTTCATGATAACAG
TTTGCTTGTAGAGGCTGTCG

Downstream 100 bases:

>100_bases
CAATTGGGGCGTTAACTTGATGAAAACCGCACCCCGGCCAATTTGCCTCACTGTGGCCCGCATAGAATTATTGGCTTTGG
CGGCGACAGCCGCGCTCACG

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; Nitrite And Nitric Oxide Reductase Regulator; Crp Family Transcriptional Regulator; Crp-Fnr Regulatory Protein; Denitrification Transcriptional Regulator Protein; Transcription Regulator; CAMP-Bindin Transcriptional Regulator; Crp-Like Transcriptional Regulator; Flp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRAGLRWRKLGSVISTRSTRTREGRRQIIVQTRGLASHLKIIGAVELFRDLPHEALVHAHACARIERLPKHARIFEQGAR
AERAYAVAKGSVRIIQTGSDGGQAIIRFIGSGEMFGTVPLFTDHLLPADAITAEASVVLSWSEADIVVLIGIYPQVSLNV
IRVIGTRLIELQDRVRELATQRADQRLARALLRLIRNDGGDEVAFPLRRKDLAEFSGTTLHTASRMLSAWARAGLLTSIG
RRILIHDRTALDSLAEGRPLL

Sequences:

>Translated_261_residues
MRAGLRWRKLGSVISTRSTRTREGRRQIIVQTRGLASHLKIIGAVELFRDLPHEALVHAHACARIERLPKHARIFEQGAR
AERAYAVAKGSVRIIQTGSDGGQAIIRFIGSGEMFGTVPLFTDHLLPADAITAEASVVLSWSEADIVVLIGIYPQVSLNV
IRVIGTRLIELQDRVRELATQRADQRLARALLRLIRNDGGDEVAFPLRRKDLAEFSGTTLHTASRMLSAWARAGLLTSIG
RRILIHDRTALDSLAEGRPLL
>Mature_261_residues
MRAGLRWRKLGSVISTRSTRTREGRRQIIVQTRGLASHLKIIGAVELFRDLPHEALVHAHACARIERLPKHARIFEQGAR
AERAYAVAKGSVRIIQTGSDGGQAIIRFIGSGEMFGTVPLFTDHLLPADAITAEASVVLSWSEADIVVLIGIYPQVSLNV
IRVIGTRLIELQDRVRELATQRADQRLARALLRLIRNDGGDEVAFPLRRKDLAEFSGTTLHTASRMLSAWARAGLLTSIG
RRILIHDRTALDSLAEGRPLL

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787595, Length=234, Percent_Identity=24.3589743589744, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789756, Length=196, Percent_Identity=23.469387755102, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28850; Mature: 28850

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGLRWRKLGSVISTRSTRTREGRRQIIVQTRGLASHLKIIGAVELFRDLPHEALVHAH
CCCCCHHHHHHHHHHHCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
ACARIERLPKHARIFEQGARAERAYAVAKGSVRIIQTGSDGGQAIIRFIGSGEMFGTVPL
HHHHHHHCHHHHHHHHHCCCHHHHHHEECCCEEEEEECCCCHHHHHHHHCCCCCEEECHH
FTDHLLPADAITAEASVVLSWSEADIVVLIGIYPQVSLNVIRVIGTRLIELQDRVRELAT
HHHCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QRADQRLARALLRLIRNDGGDEVAFPLRRKDLAEFSGTTLHTASRMLSAWARAGLLTSIG
HHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
RRILIHDRTALDSLAEGRPLL
CEEEEECHHHHHHHHCCCCCC
>Mature Secondary Structure
MRAGLRWRKLGSVISTRSTRTREGRRQIIVQTRGLASHLKIIGAVELFRDLPHEALVHAH
CCCCCHHHHHHHHHHHCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
ACARIERLPKHARIFEQGARAERAYAVAKGSVRIIQTGSDGGQAIIRFIGSGEMFGTVPL
HHHHHHHCHHHHHHHHHCCCHHHHHHEECCCEEEEEECCCCHHHHHHHHCCCCCEEECHH
FTDHLLPADAITAEASVVLSWSEADIVVLIGIYPQVSLNVIRVIGTRLIELQDRVRELAT
HHHCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QRADQRLARALLRLIRNDGGDEVAFPLRRKDLAEFSGTTLHTASRMLSAWARAGLLTSIG
HHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
RRILIHDRTALDSLAEGRPLL
CEEEEECHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA