Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550630
Identifier: 148550630
GI number: 148550630
Start: 80651
End: 81421
Strand: Reverse
Name: 148550630
Synonym: Swit_5191
Alternate gene names: NA
Gene position: 81421-80651 (Counterclockwise)
Preceding gene: 148550631
Following gene: 148550628
Centisome position: 26.25
GC content: 65.63
Gene sequence:
>771_bases ATGCAGCCTGAGAGCCCCAAGCGCCACTATCTTCCCGCCGCCTTCGACAACAGCGCTGTCCGAATCCTGCTCGTGGGATG CGGTGGAAACGGAGCGCAAATGCTGATGGGGCTCGCCTCGCTCGATACCGCATTGCGCGCAATTTCCTCACGCTCGCTCG AGGTCACCGTGGTCGACGAAGACATCGTCACCGAGGCGAATCTCGGCCGCCAGCCCTTCTACCGCTGCGATCTCGGCAAT TCGAAGGCGAGGACGCTGACCGAACGGATCAACCTTGCCCATGGTCTGGCCTGGAAGGCGGTCCACGGCCGCGCACCCGG AGCGATCGGCGTCGACAACAGCCATGTGCTCATCAGCTGCGTCGACACGGCCTCGGCCCGCCGCGCGCTGGGCGCGGCGC TGCAGGATGCGCGGAACCCGCCCATCTATTGGTTGGACCTCGGCAACCGCGCCAGCGACGGCCAATATCTGATCGGATGC CCGGGCCGTGGAACCGGCCGCGACGATAATCGCCTTCCAACGGTGCTCGAGGCTTTTCCCGAACTCGCCGACGAGGGCCT GGCCGAAGACGATGCGCCCTCCTGTTCGGTCGCCGAGGCGCTCGAGCGCCAGTCGCTCTTCGTCAACCGGGTGCTTGCGA GCCACGCGCTGGCGCTCCTGTTCGATCTGCTCGGACGCGGGTCGATTGGCCACGCCGGCGCCTTCGTGAATCTTGCCACC GGGTACAGCGTTCCGATCCCGCTACCTATGAAGGTCGTTTCCCTGTGCTAA
Upstream 100 bases:
>100_bases GCCGGCTCCACGATCCCGCTGGCCCGGTCATGGCAGCGCGGCTCTGCGCGGGCGGCATGTTCCTGGCCGTACCGCGCAGT CCATTTTCCGGAGACAATCC
Downstream 100 bases:
>100_bases AGCAGGTGGCTCGCCACCCCTGTGAACGGTGATGGTCCGGTTGCGTCACCGCGCTCGGACCATAGCATTATTCTGCCGAG GCCGTTTCAGCAGGAGCGAT
Product: UBA/THIF-type NAD/FAD binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQPESPKRHYLPAAFDNSAVRILLVGCGGNGAQMLMGLASLDTALRAISSRSLEVTVVDEDIVTEANLGRQPFYRCDLGN SKARTLTERINLAHGLAWKAVHGRAPGAIGVDNSHVLISCVDTASARRALGAALQDARNPPIYWLDLGNRASDGQYLIGC PGRGTGRDDNRLPTVLEAFPELADEGLAEDDAPSCSVAEALERQSLFVNRVLASHALALLFDLLGRGSIGHAGAFVNLAT GYSVPIPLPMKVVSLC
Sequences:
>Translated_256_residues MQPESPKRHYLPAAFDNSAVRILLVGCGGNGAQMLMGLASLDTALRAISSRSLEVTVVDEDIVTEANLGRQPFYRCDLGN SKARTLTERINLAHGLAWKAVHGRAPGAIGVDNSHVLISCVDTASARRALGAALQDARNPPIYWLDLGNRASDGQYLIGC PGRGTGRDDNRLPTVLEAFPELADEGLAEDDAPSCSVAEALERQSLFVNRVLASHALALLFDLLGRGSIGHAGAFVNLAT GYSVPIPLPMKVVSLC >Mature_256_residues MQPESPKRHYLPAAFDNSAVRILLVGCGGNGAQMLMGLASLDTALRAISSRSLEVTVVDEDIVTEANLGRQPFYRCDLGN SKARTLTERINLAHGLAWKAVHGRAPGAIGVDNSHVLISCVDTASARRALGAALQDARNPPIYWLDLGNRASDGQYLIGC PGRGTGRDDNRLPTVLEAFPELADEGLAEDDAPSCSVAEALERQSLFVNRVLASHALALLFDLLGRGSIGHAGAFVNLAT GYSVPIPLPMKVVSLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27137; Mature: 27137
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPESPKRHYLPAAFDNSAVRILLVGCGGNGAQMLMGLASLDTALRAISSRSLEVTVVDE CCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECH DIVTEANLGRQPFYRCDLGNSKARTLTERINLAHGLAWKAVHGRAPGAIGVDNSHVLISC HHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEE VDTASARRALGAALQDARNPPIYWLDLGNRASDGQYLIGCPGRGTGRDDNRLPTVLEAFP ECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH ELADEGLAEDDAPSCSVAEALERQSLFVNRVLASHALALLFDLLGRGSIGHAGAFVNLAT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC GYSVPIPLPMKVVSLC CCCCCCCCCHHHHHCC >Mature Secondary Structure MQPESPKRHYLPAAFDNSAVRILLVGCGGNGAQMLMGLASLDTALRAISSRSLEVTVVDE CCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECH DIVTEANLGRQPFYRCDLGNSKARTLTERINLAHGLAWKAVHGRAPGAIGVDNSHVLISC HHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEE VDTASARRALGAALQDARNPPIYWLDLGNRASDGQYLIGCPGRGTGRDDNRLPTVLEAFP ECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH ELADEGLAEDDAPSCSVAEALERQSLFVNRVLASHALALLFDLLGRGSIGHAGAFVNLAT HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC GYSVPIPLPMKVVSLC CCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA