Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550631

Identifier: 148550631

GI number: 148550631

Start: 81316

End: 82065

Strand: Reverse

Name: 148550631

Synonym: Swit_5192

Alternate gene names: NA

Gene position: 82065-81316 (Counterclockwise)

Preceding gene: 148550632

Following gene: 148550630

Centisome position: 26.45

GC content: 66.67

Gene sequence:

>750_bases
ATGATCGCCGAAGATCCGACCGCGGCGGCACTGCTCGCTGTCGTGCCCTGCTATCCGGTGCCATCGAGCGGTGGCTCGCC
GGCACTCGACGCGCTTCGCGGCAGCCGTGCCGGCCACGGCCTTGCGGTGGGCAAGGATGGCGTAATGCTCATCCTGCGCC
GGCCATGGCTTGCTCTCGATGCGCCGGTGACGCCGCCGATCGCCGCCTATCTTCCTTATGGCAGCATCGGGTCACCCAAG
GCCGACCTGCGCTGCGGACTGATCCCTGGCGAGCATCTGGCTGCGATCCTCGATCACTTCCGGGCGGCTCTGCCCAACGA
GGCTGCGGCCTTCATCCTCTGGAACGAGACGACCAACACGTTCGCGGTCGATTTTCCGGCAATCGACGACGCCACGCCGA
CACGCCTCGTCTATCGCCCCCCGGTCTGCGAGCCGGGCTGGCACATGGTCTGCGACATCCACAGCCACGGGCGGGGGCCC
GCCTATTTCAGCGCGACCGACGATGCGGACGACGCCCACGCTACGAAAATTTCGCTCGTCATCGGCCGGCTCCACGATCC
CGCTGGCCCGGTCATGGCAGCGCGGCTCTGCGCGGGCGGCATGTTCCTGGCCGTACCGCGCAGTCCATTTTCCGGAGACA
ATCCATGCAGCCTGAGAGCCCCAAGCGCCACTATCTTCCCGCCGCCTTCGACAACAGCGCTGTCCGAATCCTGCTCGTGG
GATGCGGTGGAAACGGAGCGCAAATGCTGA

Upstream 100 bases:

>100_bases
TCCGATCCTTCCATCCTGCCGCCGGCCAGCGGCAAGTCCGTCCCGCCGCTGATGCGGTCACGGTCGGTATGCTCGTTGCC
GCAGCGGCAGGGAGATGATC

Downstream 100 bases:

>100_bases
TGGGGCTCGCCTCGCTCGATACCGCATTGCGCGCAATTTCCTCACGCTCGCTCGAGGTCACCGTGGTCGACGAAGACATC
GTCACCGAGGCGAATCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK
ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP
AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW
DAVETERKC

Sequences:

>Translated_249_residues
MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK
ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP
AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW
DAVETERKC
>Mature_249_residues
MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK
ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP
AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW
DAVETERKC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26127; Mature: 26127

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALD
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCEEEC
APVTPPIAAYLPYGSIGSPKADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNT
CCCCCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE
FAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGPAYFSATDDADDAHATKISLV
EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHEEEEEE
IGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW
EECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCEEECCCCCHHHHCCCCC
DAVETERKC
CCCCCCCCC
>Mature Secondary Structure
MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALD
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCEEEC
APVTPPIAAYLPYGSIGSPKADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNT
CCCCCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE
FAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGPAYFSATDDADDAHATKISLV
EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHEEEEEE
IGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW
EECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCEEECCCCCHHHHCCCCC
DAVETERKC
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA