Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550631
Identifier: 148550631
GI number: 148550631
Start: 81316
End: 82065
Strand: Reverse
Name: 148550631
Synonym: Swit_5192
Alternate gene names: NA
Gene position: 82065-81316 (Counterclockwise)
Preceding gene: 148550632
Following gene: 148550630
Centisome position: 26.45
GC content: 66.67
Gene sequence:
>750_bases ATGATCGCCGAAGATCCGACCGCGGCGGCACTGCTCGCTGTCGTGCCCTGCTATCCGGTGCCATCGAGCGGTGGCTCGCC GGCACTCGACGCGCTTCGCGGCAGCCGTGCCGGCCACGGCCTTGCGGTGGGCAAGGATGGCGTAATGCTCATCCTGCGCC GGCCATGGCTTGCTCTCGATGCGCCGGTGACGCCGCCGATCGCCGCCTATCTTCCTTATGGCAGCATCGGGTCACCCAAG GCCGACCTGCGCTGCGGACTGATCCCTGGCGAGCATCTGGCTGCGATCCTCGATCACTTCCGGGCGGCTCTGCCCAACGA GGCTGCGGCCTTCATCCTCTGGAACGAGACGACCAACACGTTCGCGGTCGATTTTCCGGCAATCGACGACGCCACGCCGA CACGCCTCGTCTATCGCCCCCCGGTCTGCGAGCCGGGCTGGCACATGGTCTGCGACATCCACAGCCACGGGCGGGGGCCC GCCTATTTCAGCGCGACCGACGATGCGGACGACGCCCACGCTACGAAAATTTCGCTCGTCATCGGCCGGCTCCACGATCC CGCTGGCCCGGTCATGGCAGCGCGGCTCTGCGCGGGCGGCATGTTCCTGGCCGTACCGCGCAGTCCATTTTCCGGAGACA ATCCATGCAGCCTGAGAGCCCCAAGCGCCACTATCTTCCCGCCGCCTTCGACAACAGCGCTGTCCGAATCCTGCTCGTGG GATGCGGTGGAAACGGAGCGCAAATGCTGA
Upstream 100 bases:
>100_bases TCCGATCCTTCCATCCTGCCGCCGGCCAGCGGCAAGTCCGTCCCGCCGCTGATGCGGTCACGGTCGGTATGCTCGTTGCC GCAGCGGCAGGGAGATGATC
Downstream 100 bases:
>100_bases TGGGGCTCGCCTCGCTCGATACCGCATTGCGCGCAATTTCCTCACGCTCGCTCGAGGTCACCGTGGTCGACGAAGACATC GTCACCGAGGCGAATCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW DAVETERKC
Sequences:
>Translated_249_residues MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW DAVETERKC >Mature_249_residues MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALDAPVTPPIAAYLPYGSIGSPK ADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNTFAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGP AYFSATDDADDAHATKISLVIGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW DAVETERKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26127; Mature: 26127
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALD CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCEEEC APVTPPIAAYLPYGSIGSPKADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNT CCCCCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE FAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGPAYFSATDDADDAHATKISLV EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHEEEEEE IGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW EECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCEEECCCCCHHHHCCCCC DAVETERKC CCCCCCCCC >Mature Secondary Structure MIAEDPTAAALLAVVPCYPVPSSGGSPALDALRGSRAGHGLAVGKDGVMLILRRPWLALD CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCEEEC APVTPPIAAYLPYGSIGSPKADLRCGLIPGEHLAAILDHFRAALPNEAAAFILWNETTNT CCCCCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE FAVDFPAIDDATPTRLVYRPPVCEPGWHMVCDIHSHGRGPAYFSATDDADDAHATKISLV EEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHEEEEEE IGRLHDPAGPVMAARLCAGGMFLAVPRSPFSGDNPCSLRAPSATIFPPPSTTALSESCSW EECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCEEECCCCCHHHHCCCCC DAVETERKC CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA