Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550616
Identifier: 148550616
GI number: 148550616
Start: 70160
End: 71098
Strand: Reverse
Name: 148550616
Synonym: Swit_5177
Alternate gene names: NA
Gene position: 71098-70160 (Counterclockwise)
Preceding gene: 148550617
Following gene: 148550615
Centisome position: 22.92
GC content: 65.28
Gene sequence:
>939_bases ATGTCGACCTATCATGTCGCCTTCACGGCGCGTGTCCCTCACTGGATTCTCGAGCACGCCGAGGCCGGGAACACGGACCG TGCGCGCAGCTGGATCCTCTTGCAAGGCTGGTATGAGCGCCGCAGGCTCGAATGGAACGCCACGCTTACGGTGGAACCGG ACAAGGCCCACTCCCCGATACGCCATGAGGTCATTCTCGATCTCGATTGTCCCGAAACCGACAGGCCCAGCGCCGCCTCG TTCGCGTTCACCGTCAAGGTAGGCGTTCGCCATGGCGAGGATCCGATCCACAAAGCGCGCCGCGTGCTCGATCTGTCCCG CCGCCGTGACTCGCTGTGCCGCAAGGCCGACCGCTGGGACGTTCTGGACCGCGGCTCGTTTCGCGCCGTGCGCGGCAGTT CGCTGATTGGACCGATGCCGCCGCAGTGGCCCATCGACCGGACGCTGACCGCCTTTTCGAGCCATCTGGGGAGCTATGGA CAAGGCGGGGTCGGCCTCGCGGGCTGGCAATGCAACGGGGGATCATGGATGGTGCTGCCGCTGACCTACTCCGACGGATG GATCTGGCTCACGCGCGAGGAGATACGGCCAGCGCCGGACCATCGGTCACTTGCGATCGCTGTCGATCAGCGAATCCTCG GTGTGCATCCCGATCAGCTCGCGGACTTCCCGCCCTGGGAGCATCGCTATGCCGGTCAACATCAGATCCTCGACATGCCT GACTTCGGAGCCGAAAGGCCCACAATCCTGCGGTTCGACGCGAGCGAGACCGGCTTCATCCTCGAGGCCGCCAACGGTCC GACCCGCTGGCGCTTCGCCATGGGCGACGACCTACCGCGCCCTGTCTGGGGCGGTTCGCGGAAACCGCGGCTGCTGTGCG AGGGCGAATCCGTCGCCGAGGCCTTCTGCCTCGCCCATGATTGCTATCTTGAAGTCTGA
Upstream 100 bases:
>100_bases AAGTCCGGCCGCAATACGCCTGACCACGCACGCGCAGGCAACCGGTCCGCGCCTGCTCCCTCCTGACCCCCCAGACCGAC CATCCCAAGGAGGATTCTCC
Downstream 100 bases:
>100_bases CCGGGGTCACGCACGTAGCACTCGCCCACGCGCTACCGCGATCGTTGCTGTGACCGCATGCCATCGGTCGCGGCCCGCTG ACCTACCGCTTCCGACATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAAS FAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYG QGGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV
Sequences:
>Translated_312_residues MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAAS FAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYG QGGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV >Mature_311_residues STYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPIRHEVILDLDCPETDRPSAASF AFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWDVLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQ GGVGLAGWQCNGGSWMVLPLTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMPD FGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAEAFCLAHDCYLEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35360; Mature: 35229
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPI CCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEECCHHCCEEEECEEEEECCCCCCCCC RHEVILDLDCPETDRPSAASFAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWD CEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQGGVGLAGWQCNGGSWMVLP CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEE LTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP EEECCCEEEEEHHHCCCCCCCCEEEEEECCCEECCCHHHHCCCCCHHHHCCCCCEEECCC DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAE CCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHH AFCLAHDCYLEV HHHHHHEEEEEC >Mature Secondary Structure STYHVAFTARVPHWILEHAEAGNTDRARSWILLQGWYERRRLEWNATLTVEPDKAHSPI CEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEECCHHCCEEEECEEEEECCCCCCCCC RHEVILDLDCPETDRPSAASFAFTVKVGVRHGEDPIHKARRVLDLSRRRDSLCRKADRWD CEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VLDRGSFRAVRGSSLIGPMPPQWPIDRTLTAFSSHLGSYGQGGVGLAGWQCNGGSWMVLP CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEE LTYSDGWIWLTREEIRPAPDHRSLAIAVDQRILGVHPDQLADFPPWEHRYAGQHQILDMP EEECCCEEEEEHHHCCCCCCCCEEEEEECCCEECCCHHHHCCCCCHHHHCCCCCEEECCC DFGAERPTILRFDASETGFILEAANGPTRWRFAMGDDLPRPVWGGSRKPRLLCEGESVAE CCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHH AFCLAHDCYLEV HHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA