Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
---|---|
Accession | NC_009507 |
Length | 310,228 |
Click here to switch to the map view.
The map label for this gene is 148550615
Identifier: 148550615
GI number: 148550615
Start: 69779
End: 70051
Strand: Reverse
Name: 148550615
Synonym: Swit_5176
Alternate gene names: NA
Gene position: 70051-69779 (Counterclockwise)
Preceding gene: 148550616
Following gene: 148550614
Centisome position: 22.58
GC content: 66.3
Gene sequence:
>273_bases ATGATCGTAATTTCAGGCCTGCGATGGAAGGTCCTGGCAGCCAGCGCCCCAGCCTGCTGCGACCCGGCAGATGTATGCCG CGAGGCCGTCGAACACTGCAACGCCTTGAGGGTCGGCATCGACGTCAGCTTCCGCGACAACATCATCGAAGCCCGGCCCG GCAGCGATCCCGCGCAGCTCGCCGACATCTTCGAGCGCCGCGCGGCCGAGCTGGCCAAGCCGGTCGGCTCTCCCTCGTCC GACCACGTTCAGTCCCAAGGGGAACGACCATGA
Upstream 100 bases:
>100_bases ACGCACGTAGCACTCGCCCACGCGCTACCGCGATCGTTGCTGTGACCGCATGCCATCGGTCGCGGCCCGCTGACCTACCG CTTCCGACATGGAGGATCAC
Downstream 100 bases:
>100_bases CCACCATCGTCCTGAGCAACGGCCATTTGCGCACAGAGACCGCCGACGCGGCGATCGACGCGCTGATCGAGATCCTGCGC GATCATCCGCTCAACCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS DHVQSQGERP
Sequences:
>Translated_90_residues MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS DHVQSQGERP >Mature_90_residues MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS DHVQSQGERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9639; Mature: 9639
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQL CEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCHHHH ADIFERRAAELAKPVGSPSSDHVQSQGERP HHHHHHHHHHHHHCCCCCCCCHHCCCCCCC >Mature Secondary Structure MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQL CEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCHHHH ADIFERRAAELAKPVGSPSSDHVQSQGERP HHHHHHHHHHHHHCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA