Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550615

Identifier: 148550615

GI number: 148550615

Start: 69779

End: 70051

Strand: Reverse

Name: 148550615

Synonym: Swit_5176

Alternate gene names: NA

Gene position: 70051-69779 (Counterclockwise)

Preceding gene: 148550616

Following gene: 148550614

Centisome position: 22.58

GC content: 66.3

Gene sequence:

>273_bases
ATGATCGTAATTTCAGGCCTGCGATGGAAGGTCCTGGCAGCCAGCGCCCCAGCCTGCTGCGACCCGGCAGATGTATGCCG
CGAGGCCGTCGAACACTGCAACGCCTTGAGGGTCGGCATCGACGTCAGCTTCCGCGACAACATCATCGAAGCCCGGCCCG
GCAGCGATCCCGCGCAGCTCGCCGACATCTTCGAGCGCCGCGCGGCCGAGCTGGCCAAGCCGGTCGGCTCTCCCTCGTCC
GACCACGTTCAGTCCCAAGGGGAACGACCATGA

Upstream 100 bases:

>100_bases
ACGCACGTAGCACTCGCCCACGCGCTACCGCGATCGTTGCTGTGACCGCATGCCATCGGTCGCGGCCCGCTGACCTACCG
CTTCCGACATGGAGGATCAC

Downstream 100 bases:

>100_bases
CCACCATCGTCCTGAGCAACGGCCATTTGCGCACAGAGACCGCCGACGCGGCGATCGACGCGCTGATCGAGATCCTGCGC
GATCATCCGCTCAACCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS
DHVQSQGERP

Sequences:

>Translated_90_residues
MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS
DHVQSQGERP
>Mature_90_residues
MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQLADIFERRAAELAKPVGSPSS
DHVQSQGERP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9639; Mature: 9639

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQL
CEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCHHHH
ADIFERRAAELAKPVGSPSSDHVQSQGERP
HHHHHHHHHHHHHCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MIVISGLRWKVLAASAPACCDPADVCREAVEHCNALRVGIDVSFRDNIIEARPGSDPAQL
CEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCHHHH
ADIFERRAAELAKPVGSPSSDHVQSQGERP
HHHHHHHHHHHHHCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA