Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550586
Identifier: 148550586
GI number: 148550586
Start: 39901
End: 40575
Strand: Reverse
Name: 148550586
Synonym: Swit_5147
Alternate gene names: NA
Gene position: 40575-39901 (Counterclockwise)
Preceding gene: 148550587
Following gene: 148550583
Centisome position: 13.08
GC content: 57.04
Gene sequence:
>675_bases ATGGTCGAGCGCGGCCCAAGCCAGTGGCCGGTCCTGTTCGATCTTGCGATGGAAATCTTCGCCCAATTCGAGGAGAACGT CGGCTTCGTGCCCTCGTGGAGCTTCGGCGGCGGGACGGCGCTCATGCTCCAGATCGATCATCGTGAAAGCCACGACATCG ATATCTTCCTTGATGATCCGCAAATCCTGCCTTTTCTCAATCCAGAGATCCAGGATTTCGCAATGACCCGTCGGCCGGAC GAATATAAGAGCGACGGGACGCAGGCGCTCAAACTCGCCTTTGACGAACTGGGTGAGATCGACTTCATTTGTTCGTCCGC CATCCTCGATGTTTCCAGTGAGCGCCACGATGTGAGGGGGCGGACGGTCGACCTTGAAACTCCGGCCGAGATTGCAGCGA AGAAAGTTTACTTCCGGGGCTGGAACTTGCAGCCACGCGACATGTTCGATCTTGCTGCCATCGCCGAGCACCATGGTGAC GACTATGTCGTGTCAGCATTGCGTGAATGCGGCCATGAGCGATGCCGCAAGGCGCTGGAAGTCGTCGAGAAGGTCAACCC GAAGGCTGTCGAGACGGTGATTGGCCAGCTGCTGTACAGGGAAAAGAACAGCCATCTGGTCGCAGAGGCGCAGGCGATTA CGCACCGAATTTTAGGGGCTTCACTTTCCGATTAA
Upstream 100 bases:
>100_bases GTTCGTCGAGGAAATGGGTGTCGACGCCGACAAGGTCTGCGCGGTCGCCGACCAGTTCTCCCACCTCTCGGGCTACGCGC TCCCGCTGGCGGCGTAACGC
Downstream 100 bases:
>100_bases GACGGTCGCAGCACGGGCGCGAGGAGCCGTTCGGCACGAGCCGAACCGTATTCCTTCACCGCACGCGCGAGCTGCGCGCT ATTCATCTCCCCTGCCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MVERGPSQWPVLFDLAMEIFAQFEENVGFVPSWSFGGGTALMLQIDHRESHDIDIFLDDPQILPFLNPEIQDFAMTRRPD EYKSDGTQALKLAFDELGEIDFICSSAILDVSSERHDVRGRTVDLETPAEIAAKKVYFRGWNLQPRDMFDLAAIAEHHGD DYVVSALRECGHERCRKALEVVEKVNPKAVETVIGQLLYREKNSHLVAEAQAITHRILGASLSD
Sequences:
>Translated_224_residues MVERGPSQWPVLFDLAMEIFAQFEENVGFVPSWSFGGGTALMLQIDHRESHDIDIFLDDPQILPFLNPEIQDFAMTRRPD EYKSDGTQALKLAFDELGEIDFICSSAILDVSSERHDVRGRTVDLETPAEIAAKKVYFRGWNLQPRDMFDLAAIAEHHGD DYVVSALRECGHERCRKALEVVEKVNPKAVETVIGQLLYREKNSHLVAEAQAITHRILGASLSD >Mature_224_residues MVERGPSQWPVLFDLAMEIFAQFEENVGFVPSWSFGGGTALMLQIDHRESHDIDIFLDDPQILPFLNPEIQDFAMTRRPD EYKSDGTQALKLAFDELGEIDFICSSAILDVSSERHDVRGRTVDLETPAEIAAKKVYFRGWNLQPRDMFDLAAIAEHHGD DYVVSALRECGHERCRKALEVVEKVNPKAVETVIGQLLYREKNSHLVAEAQAITHRILGASLSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25284; Mature: 25284
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERGPSQWPVLFDLAMEIFAQFEENVGFVPSWSFGGGTALMLQIDHRESHDIDIFLDDP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCC QILPFLNPEIQDFAMTRRPDEYKSDGTQALKLAFDELGEIDFICSSAILDVSSERHDVRG CCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCC RTVDLETPAEIAAKKVYFRGWNLQPRDMFDLAAIAEHHGDDYVVSALRECGHERCRKALE CEECCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VVEKVNPKAVETVIGQLLYREKNSHLVAEAQAITHRILGASLSD HHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVERGPSQWPVLFDLAMEIFAQFEENVGFVPSWSFGGGTALMLQIDHRESHDIDIFLDDP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCC QILPFLNPEIQDFAMTRRPDEYKSDGTQALKLAFDELGEIDFICSSAILDVSSERHDVRG CCCCCCCCCHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCC RTVDLETPAEIAAKKVYFRGWNLQPRDMFDLAAIAEHHGDDYVVSALRECGHERCRKALE CEECCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VVEKVNPKAVETVIGQLLYREKNSHLVAEAQAITHRILGASLSD HHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA