Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550587

Identifier: 148550587

GI number: 148550587

Start: 40579

End: 40842

Strand: Reverse

Name: 148550587

Synonym: Swit_5148

Alternate gene names: NA

Gene position: 40842-40579 (Counterclockwise)

Preceding gene: 148550588

Following gene: 148550586

Centisome position: 13.17

GC content: 62.12

Gene sequence:

>264_bases
ATGGCAAAGGCGGTAAGCTTGGTGTTGGCGACGGTGAACGCTCCTTATGGGGCGAACCTTTCCGCGCATCAACTCGCTGC
GCTGATCGCCGACCCAAAGAGCGCGAGCGATTTCAACGCGCCCGTGTTTTCCTTCTTCTCGGAAGTAAGCCCGGCTCTGC
AGCTGCAGTTCGTCGAGGAAATGGGTGTCGACGCCGACAAGGTCTGCGCGGTCGCCGACCAGTTCTCCCACCTCTCGGGC
TACGCGCTCCCGCTGGCGGCGTAA

Upstream 100 bases:

>100_bases
TCCCGCCTGGCCGGATAGCGGATTGGCGCCGTTCTTGTTTTGATAACGCCGAAGCGCTATATGCGCTGAACGATCCACGA
GATCATGGTACAGGTTAGAA

Downstream 100 bases:

>100_bases
CGCATGGTCGAGCGCGGCCCAAGCCAGTGGCCGGTCCTGTTCGATCTTGCGATGGAAATCTTCGCCCAATTCGAGGAGAA
CGTCGGCTTCGTGCCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MAKAVSLVLATVNAPYGANLSAHQLAALIADPKSASDFNAPVFSFFSEVSPALQLQFVEEMGVDADKVCAVADQFSHLSG
YALPLAA

Sequences:

>Translated_87_residues
MAKAVSLVLATVNAPYGANLSAHQLAALIADPKSASDFNAPVFSFFSEVSPALQLQFVEEMGVDADKVCAVADQFSHLSG
YALPLAA
>Mature_86_residues
AKAVSLVLATVNAPYGANLSAHQLAALIADPKSASDFNAPVFSFFSEVSPALQLQFVEEMGVDADKVCAVADQFSHLSGY
ALPLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9027; Mature: 8896

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAVSLVLATVNAPYGANLSAHQLAALIADPKSASDFNAPVFSFFSEVSPALQLQFVEE
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
MGVDADKVCAVADQFSHLSGYALPLAA
HCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKAVSLVLATVNAPYGANLSAHQLAALIADPKSASDFNAPVFSFFSEVSPALQLQFVEE
CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
MGVDADKVCAVADQFSHLSGYALPLAA
HCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA