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The map label for this gene is 148550582

Identifier: 148550582

GI number: 148550582

Start: 36884

End: 37858

Strand: Reverse

Name: 148550582

Synonym: Swit_5143

Alternate gene names: NA

Gene position: 37858-36884 (Counterclockwise)

Preceding gene: 148550583

Following gene: 148550581

Centisome position: 12.2

GC content: 64.62

Gene sequence:

>975_bases
ATGACCGAGAGCGACGTCGGGATCAGGGAAGGTGCGCGCGCGCAGCCGGCCAAACGGTTCCGCATTCTGGCGCTGACCGG
AGGTGGGTATCGTGGCCTCTTTACCGTTCGGATCCTCGAACAGATCGAGCGGACGATCGGAAAGCCGATCAAAGACCATT
TCGATATCATCGCCGGCACTTCGATCGGCGGCATCGTGGCCATCGGCCTGGCCCAAGGCATTCGCCCAGCCGTGATCGGC
GCCGCGTTTGAGAAGCACGGCCAGGCGATCTTCCCGAAGCGGGGTTTACTCGGTCGCTGGGGGCTGGCGCGCTCGCGCTA
TGACGCGGCTGGCCTCGCGCAGACGATCGACGCCGTTCTTGGCGAAGCGGGAAAGACGCCCCTGTCCGGCCTGAAGACAC
CCCTGATCGTGACCGCGGTCGATTTCGGCGCCTGGGCGCCGGCAATATACGAAACCACTGGCATGTCACCGAAGCTCGAA
GGAACCTCGCTACGGGACATTGCCCTCGCCACCTCCGCGGCGCCAACCTATTTCCCCGACCATGTGATCGACGGGCATTC
CTATGTCGACGGCGGACTGATCGCGAACGCTCCGGATAGTATCGCCCTGATGCGGGCGCTTGGGCGCTATGGGCGCACGC
CCCAGGAAATCGACCTCATCAGCGTCGGGACCGCAGGAGAGCTGCGATGGGATGTGCCGCGTGCGCCCAGGCGCCGCGGC
GGTGTGATGCTGATCGCAAAAGACGAGCTCGTGTCGAGGACGATGAAGGCGCAGGAGAGCCTGTCGCTCGACCTCGTGCA
GTCCGTCCTGGGCTCGAGCTACGTCCGCATCGATAGGGTGCCTTCGCTCCAGCAGCAGAAGGAACTTGCGCTCGATCGGG
CAACCGACAAAGCGGCCGAGATCCTGGGACAGCTCGCGCGCGACGCCTATGCGGGAGCCTCGGCGAGCAGCACGTTCAAA
GCGATGCTTCGATAG

Upstream 100 bases:

>100_bases
ATGGTCGTTGCCTCGGCTCTCGCTACCAATCTTGTCTTCGTCGACTATCCGCAGCCCTACCATAGCGGCGTCAGCGGGCT
GACGGTGGTGAACCCTTGAT

Downstream 100 bases:

>100_bases
GGGACGGGTGGCGGACTGACCAAGCCTTACGTTCCAGAAAATGCTGCCTGTCCGTCAAGCATCTGCCCAACATGACCTCA
ACACGGATCTACTCTGACGA

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Patatin Family Protein; Phospholipase Patatin Family; Patatin-Related Protein; Phospholipase; Patatin-Like Protein; Patatin Family Phospholipase

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTESDVGIREGARAQPAKRFRILALTGGGYRGLFTVRILEQIERTIGKPIKDHFDIIAGTSIGGIVAIGLAQGIRPAVIG
AAFEKHGQAIFPKRGLLGRWGLARSRYDAAGLAQTIDAVLGEAGKTPLSGLKTPLIVTAVDFGAWAPAIYETTGMSPKLE
GTSLRDIALATSAAPTYFPDHVIDGHSYVDGGLIANAPDSIALMRALGRYGRTPQEIDLISVGTAGELRWDVPRAPRRRG
GVMLIAKDELVSRTMKAQESLSLDLVQSVLGSSYVRIDRVPSLQQQKELALDRATDKAAEILGQLARDAYAGASASSTFK
AMLR

Sequences:

>Translated_324_residues
MTESDVGIREGARAQPAKRFRILALTGGGYRGLFTVRILEQIERTIGKPIKDHFDIIAGTSIGGIVAIGLAQGIRPAVIG
AAFEKHGQAIFPKRGLLGRWGLARSRYDAAGLAQTIDAVLGEAGKTPLSGLKTPLIVTAVDFGAWAPAIYETTGMSPKLE
GTSLRDIALATSAAPTYFPDHVIDGHSYVDGGLIANAPDSIALMRALGRYGRTPQEIDLISVGTAGELRWDVPRAPRRRG
GVMLIAKDELVSRTMKAQESLSLDLVQSVLGSSYVRIDRVPSLQQQKELALDRATDKAAEILGQLARDAYAGASASSTFK
AMLR
>Mature_323_residues
TESDVGIREGARAQPAKRFRILALTGGGYRGLFTVRILEQIERTIGKPIKDHFDIIAGTSIGGIVAIGLAQGIRPAVIGA
AFEKHGQAIFPKRGLLGRWGLARSRYDAAGLAQTIDAVLGEAGKTPLSGLKTPLIVTAVDFGAWAPAIYETTGMSPKLEG
TSLRDIALATSAAPTYFPDHVIDGHSYVDGGLIANAPDSIALMRALGRYGRTPQEIDLISVGTAGELRWDVPRAPRRRGG
VMLIAKDELVSRTMKAQESLSLDLVQSVLGSSYVRIDRVPSLQQQKELALDRATDKAAEILGQLARDAYAGASASSTFKA
MLR

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17551040, Length=217, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34516; Mature: 34385

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESDVGIREGARAQPAKRFRILALTGGGYRGLFTVRILEQIERTIGKPIKDHFDIIAGT
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SIGGIVAIGLAQGIRPAVIGAAFEKHGQAIFPKRGLLGRWGLARSRYDAAGLAQTIDAVL
CCHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
GEAGKTPLSGLKTPLIVTAVDFGAWAPAIYETTGMSPKLEGTSLRDIALATSAAPTYFPD
CCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCC
HVIDGHSYVDGGLIANAPDSIALMRALGRYGRTPQEIDLISVGTAGELRWDVPRAPRRRG
HHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCHHCC
GVMLIAKDELVSRTMKAQESLSLDLVQSVLGSSYVRIDRVPSLQQQKELALDRATDKAAE
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
ILGQLARDAYAGASASSTFKAMLR
HHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
TESDVGIREGARAQPAKRFRILALTGGGYRGLFTVRILEQIERTIGKPIKDHFDIIAGT
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
SIGGIVAIGLAQGIRPAVIGAAFEKHGQAIFPKRGLLGRWGLARSRYDAAGLAQTIDAVL
CCHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHH
GEAGKTPLSGLKTPLIVTAVDFGAWAPAIYETTGMSPKLEGTSLRDIALATSAAPTYFPD
CCCCCCCHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCC
HVIDGHSYVDGGLIANAPDSIALMRALGRYGRTPQEIDLISVGTAGELRWDVPRAPRRRG
HHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCHHCC
GVMLIAKDELVSRTMKAQESLSLDLVQSVLGSSYVRIDRVPSLQQQKELALDRATDKAAE
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
ILGQLARDAYAGASASSTFKAMLR
HHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA