Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550581

Identifier: 148550581

GI number: 148550581

Start: 35720

End: 36784

Strand: Reverse

Name: 148550581

Synonym: Swit_5142

Alternate gene names: NA

Gene position: 36784-35720 (Counterclockwise)

Preceding gene: 148550582

Following gene: 148550580

Centisome position: 11.86

GC content: 56.34

Gene sequence:

>1065_bases
ATGGCGAAGAAAACGACCAAAAGAACGCCGAAGGTCTTCCTGGATGCGAACATCGTCATCAGTGCCGGCAAACCACCAGG
CGGGCCTGAAATCGCCCGTGTCGTCGATCTTGTCGATGCCGGTCTGATAACGGTGTTGACCACCGATCTCACCATCACCG
AGGTTGCCAAAAAGTACATCCAGAGTGATTTCGACGCGATCAAGGAGATCAGCCAGCCGCATTTCCGGAAGATTGTCGAG
GGAGCGACCGGCGTTGCGCTTCCCGCGCTCAAGCGGCCGGAGCTTCGCGCAAAGCTGAAATCGATCTACGATGAGTCGAC
TACGCAGATGTTCGATGCGCTGGAGGCCAAGACGCTCCAGATCGACGAGGTGAAGCCGTCGGCAGTGTTCAGCGCCTATG
CGGCAGGGGAAGGTTTCTTCTCAGGCGACGGCAAGAAGGACCAGTTCCCCGACGCCTTTGCCTTCGAGTGCCTCAAGAAG
GAGGCGTCGAGAAATAGCCCGGTGATCATCGTTTCGAACGATGGCGACTTTGATGGCCCGGTCGGGTCTGCGAAGCATAT
TTCGCTGGTGAAGTCGTTGCCCGAACTGTTCGCGGCGCTTGGCCTCGAGATGGCCGCGCCGCAACTCGATCCCTTCCTGG
AGACGCAGGAGGAACAGATCGTCGACCTCGTCAGTCAGGAACTTACGAATTGGGGACTGCACAGTAGCGACGTCATGGAT
GCGGAGATCGACGAGATCACCGTCAATTCGGTCGAAGTGAAAAAACTCACCGCCTTCAAACCAAGTGAGGCAGGTAAATC
AATCCTTGTGGTCGGCACGATCGAGGTCGCAGCATTGGTGTCTTTCACTCATCCCAACTGGGATGAAGCGATGTATGATT
CCGAGGACAAGGTGCTTATCCCGTTCGAGGATGAGAGCGGGGAGACCGAGATCGAGCTTACCATCGACGTCGCCATGTCG
ATCGCGGTCGACGAGGCAGGCAATCCCGAGGAGATTGAAGCCTTGCGGTTTCGCAACAGCGATTTTCAGTATGTGACGCT
CTATCCACCCGACATGTACAAATAG

Upstream 100 bases:

>100_bases
GGGGACGGGTGGCGGACTGACCAAGCCTTACGTTCCAGAAAATGCTGCCTGTCCGTCAAGCATCTGCCCAACATGACCTC
AACACGGATCTACTCTGACG

Downstream 100 bases:

>100_bases
GGTCCGTGGATGAGACGATTCGAGGTCGAGAAGCAGTTCTGCGACATGGTCAGCCGGATCACATCGTTCAGGTCGAGTCG
GCGACTCTGTTTCGGGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVE
GATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKK
EASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD
AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMS
IAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK

Sequences:

>Translated_354_residues
MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVE
GATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKK
EASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD
AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMS
IAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK
>Mature_353_residues
AKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVEG
ATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKE
ASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMDA
EIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMSI
AVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38698; Mature: 38567

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYI
CCCCCCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH
QSDFDAIKEISQPHFRKIVEGATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQ
HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE
IDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKEASRNSPVIIVSNDGDFDGP
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
VGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD
CCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC
AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLI
CCCCEEEECCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEE
PFEDESGETEIELTIDVAMSIAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK
EECCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
AKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYI
CCCCCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH
QSDFDAIKEISQPHFRKIVEGATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQ
HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE
IDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKEASRNSPVIIVSNDGDFDGP
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
VGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD
CCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC
AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLI
CCCCEEEECCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEE
PFEDESGETEIELTIDVAMSIAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK
EECCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA