Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550581
Identifier: 148550581
GI number: 148550581
Start: 35720
End: 36784
Strand: Reverse
Name: 148550581
Synonym: Swit_5142
Alternate gene names: NA
Gene position: 36784-35720 (Counterclockwise)
Preceding gene: 148550582
Following gene: 148550580
Centisome position: 11.86
GC content: 56.34
Gene sequence:
>1065_bases ATGGCGAAGAAAACGACCAAAAGAACGCCGAAGGTCTTCCTGGATGCGAACATCGTCATCAGTGCCGGCAAACCACCAGG CGGGCCTGAAATCGCCCGTGTCGTCGATCTTGTCGATGCCGGTCTGATAACGGTGTTGACCACCGATCTCACCATCACCG AGGTTGCCAAAAAGTACATCCAGAGTGATTTCGACGCGATCAAGGAGATCAGCCAGCCGCATTTCCGGAAGATTGTCGAG GGAGCGACCGGCGTTGCGCTTCCCGCGCTCAAGCGGCCGGAGCTTCGCGCAAAGCTGAAATCGATCTACGATGAGTCGAC TACGCAGATGTTCGATGCGCTGGAGGCCAAGACGCTCCAGATCGACGAGGTGAAGCCGTCGGCAGTGTTCAGCGCCTATG CGGCAGGGGAAGGTTTCTTCTCAGGCGACGGCAAGAAGGACCAGTTCCCCGACGCCTTTGCCTTCGAGTGCCTCAAGAAG GAGGCGTCGAGAAATAGCCCGGTGATCATCGTTTCGAACGATGGCGACTTTGATGGCCCGGTCGGGTCTGCGAAGCATAT TTCGCTGGTGAAGTCGTTGCCCGAACTGTTCGCGGCGCTTGGCCTCGAGATGGCCGCGCCGCAACTCGATCCCTTCCTGG AGACGCAGGAGGAACAGATCGTCGACCTCGTCAGTCAGGAACTTACGAATTGGGGACTGCACAGTAGCGACGTCATGGAT GCGGAGATCGACGAGATCACCGTCAATTCGGTCGAAGTGAAAAAACTCACCGCCTTCAAACCAAGTGAGGCAGGTAAATC AATCCTTGTGGTCGGCACGATCGAGGTCGCAGCATTGGTGTCTTTCACTCATCCCAACTGGGATGAAGCGATGTATGATT CCGAGGACAAGGTGCTTATCCCGTTCGAGGATGAGAGCGGGGAGACCGAGATCGAGCTTACCATCGACGTCGCCATGTCG ATCGCGGTCGACGAGGCAGGCAATCCCGAGGAGATTGAAGCCTTGCGGTTTCGCAACAGCGATTTTCAGTATGTGACGCT CTATCCACCCGACATGTACAAATAG
Upstream 100 bases:
>100_bases GGGGACGGGTGGCGGACTGACCAAGCCTTACGTTCCAGAAAATGCTGCCTGTCCGTCAAGCATCTGCCCAACATGACCTC AACACGGATCTACTCTGACG
Downstream 100 bases:
>100_bases GGTCCGTGGATGAGACGATTCGAGGTCGAGAAGCAGTTCTGCGACATGGTCAGCCGGATCACATCGTTCAGGTCGAGTCG GCGACTCTGTTTCGGGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVE GATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKK EASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMS IAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK
Sequences:
>Translated_354_residues MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVE GATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKK EASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMS IAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK >Mature_353_residues AKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYIQSDFDAIKEISQPHFRKIVEG ATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQIDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKE ASRNSPVIIVSNDGDFDGPVGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMDA EIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLIPFEDESGETEIELTIDVAMSI AVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38698; Mature: 38567
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYI CCCCCCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH QSDFDAIKEISQPHFRKIVEGATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQ HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE IDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKEASRNSPVIIVSNDGDFDGP ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC VGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD CCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLI CCCCEEEECCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEE PFEDESGETEIELTIDVAMSIAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK EECCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure AKKTTKRTPKVFLDANIVISAGKPPGGPEIARVVDLVDAGLITVLTTDLTITEVAKKYI CCCCCCCCCEEEEECEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHH QSDFDAIKEISQPHFRKIVEGATGVALPALKRPELRAKLKSIYDESTTQMFDALEAKTLQ HHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEE IDEVKPSAVFSAYAAGEGFFSGDGKKDQFPDAFAFECLKKEASRNSPVIIVSNDGDFDGP ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC VGSAKHISLVKSLPELFAALGLEMAAPQLDPFLETQEEQIVDLVSQELTNWGLHSSDVMD CCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCCCC AEIDEITVNSVEVKKLTAFKPSEAGKSILVVGTIEVAALVSFTHPNWDEAMYDSEDKVLI CCCCEEEECCEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHCCCCCCEEE PFEDESGETEIELTIDVAMSIAVDEAGNPEEIEALRFRNSDFQYVTLYPPDMYK EECCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA