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The map label for this gene is nmoT [H]

Identifier: 148550569

GI number: 148550569

Start: 17655

End: 19160

Strand: Direct

Name: nmoT [H]

Synonym: Swit_5130

Alternate gene names: 148550569

Gene position: 17655-19160 (Clockwise)

Preceding gene: 148550566

Following gene: 148550570

Centisome position: 5.69

GC content: 66.27

Gene sequence:

>1506_bases
TTGGAGACAGTGGTTCGGATTCGGCGCGAGTATGCCGGCGGCAAGGCGATCAAGGCGATCGCGCGGGATTTGCATGTGTC
GCGGAAGGTGATCCGCAAGGCGATCCGGGCGCCGGAAGGCGCATTCGACTATCAGCGCAAGGTTCAGCCACTGCCTAGGA
TCGGGCCGTTTCAGGATCGCCTGAACACACTGCTGGAAGAGAACGAGGTGCGCGGCAGGCGCGAGCGACTGCGGATGACG
CGGATACATGATCTGCTGGAGCGCGAAGGTTTTGAGGGTTCCTACGATGCCGTTCGGCGCTACGCGGCGCGCTGGAAGGC
CGACCGGCGCAAGGATGCCGGCGATGGTGTCACCGCCTTCATCCCGCTGATGTTCAAGCCGGGCGAGGCCTACCAGTTCG
ACTGGAGCCATGAGGATGTGGAGATCGCCGGCAAGCCGATGCGCGTGAAGGTTGCGCATATGCGGCTGTGTGCATCGCGG
GCGGTCTATGTCCGGGCCTATCCGCGCGAGAGTCAGGAGATGCTGTTCGACGCGCATGCGCGCGGCTTTGCTTTCTTCGG
CGGCGTGCCGGGCCGCGGCATCTACGATAATATGAAGACGGCGGTGACGAGCGTGTTCACGGGGAAGGAGCGGGTCTTCA
ACCGGCGGTTCCTGATCATGACCGACCATTATATGGTCGAGCCCACCGCCTGCTCGCCGGCGGCGGGATGGGAGAAGGGC
CAGGTCGAGAACCAGGTGCAGACGATCCGGGGCCGCTTCTTCCAACCCCGGTTGCGGTTCGCCAGCCTCGACGAGCTCAA
TGGCTGGCTGGAGGCCGAGTGCCAGCGCTGGGCGGAACGACAGGCACACCCGGAACAGGGCGAGCTGACCGTGGCGCAGG
CGCTGGAGATCGAGCGATCGGCACTGCAGCCGATGCTGGGACCGTTCGACGGCTTTAACGAGAGCGAGCATGCGGTGACG
GGCACCTGCCTGATCAGCTTCGATCGCAACCGCTACTCGGTTCTCTCGACGGTGGCGCGGCGGACGGTGCAGGTCCGGGC
CTATGCCGACCGCATTGTCGTGCGCTGCGGCGAGGAGGTTGTCGCCGAGCATCCCCGCTACTTCGGGCGCAACCGCACGA
TCTATGACCCCTGGCATTATCTGCCGGTACTGGCCCGCAAGCCCGGAGCGCTGCGGAACGGCGCGCCCTTCCAGGACTGG
GATCTGCCGCCGGCGCTGGCGCGCCTGCGCCGCAAGCTTGGCAATGGCGACGATGCCGACCGCCGGTTCGTCCGTGTGCT
GTCGGCCGTGCTGACCGATGGTCTGGAGCCGGTCGAAGCGGCCGTCCGCGAGGCATTGGCGACCGGCACGGCGAGCGACG
ACCTGATCCTCAACATCCTGGCGCGGCGCCGCGAACCGCCGCGACCGCTCACCATCATCACCTCCGAAGACAGCGCCTTG
CGCCATCCGCCGATCGCCGACTGCGCCCGTTACGACCAGCTGAGGACCTTCGATGCAGCGGCATGA

Upstream 100 bases:

>100_bases
GACCCCGTTAGCGGGGTGATCGGCGTCTAAAAGGGACCCCTCATTTCGATGGTTTAAGCAGCCGGCTGGATTTTCAGGCG
GCGAGATCGGGATGTTGATT

Downstream 100 bases:

>100_bases
CATGATCGAGGCGATGCGCGGGCTTGGGCTCAAGGGCATGGCGGGCGCGTTCGACGATGCGGTCACCACCGGCCTTCAGC
GCCAGCGCACCACGATGGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
METVVRIRREYAGGKAIKAIARDLHVSRKVIRKAIRAPEGAFDYQRKVQPLPRIGPFQDRLNTLLEENEVRGRRERLRMT
RIHDLLEREGFEGSYDAVRRYAARWKADRRKDAGDGVTAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAHMRLCASR
AVYVRAYPRESQEMLFDAHARGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWEKG
QVENQVQTIRGRFFQPRLRFASLDELNGWLEAECQRWAERQAHPEQGELTVAQALEIERSALQPMLGPFDGFNESEHAVT
GTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEVVAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQDW
DLPPALARLRRKLGNGDDADRRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDSAL
RHPPIADCARYDQLRTFDAAA

Sequences:

>Translated_501_residues
METVVRIRREYAGGKAIKAIARDLHVSRKVIRKAIRAPEGAFDYQRKVQPLPRIGPFQDRLNTLLEENEVRGRRERLRMT
RIHDLLEREGFEGSYDAVRRYAARWKADRRKDAGDGVTAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAHMRLCASR
AVYVRAYPRESQEMLFDAHARGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWEKG
QVENQVQTIRGRFFQPRLRFASLDELNGWLEAECQRWAERQAHPEQGELTVAQALEIERSALQPMLGPFDGFNESEHAVT
GTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEVVAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQDW
DLPPALARLRRKLGNGDDADRRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDSAL
RHPPIADCARYDQLRTFDAAA
>Mature_501_residues
METVVRIRREYAGGKAIKAIARDLHVSRKVIRKAIRAPEGAFDYQRKVQPLPRIGPFQDRLNTLLEENEVRGRRERLRMT
RIHDLLEREGFEGSYDAVRRYAARWKADRRKDAGDGVTAFIPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAHMRLCASR
AVYVRAYPRESQEMLFDAHARGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWEKG
QVENQVQTIRGRFFQPRLRFASLDELNGWLEAECQRWAERQAHPEQGELTVAQALEIERSALQPMLGPFDGFNESEHAVT
GTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEVVAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQDW
DLPPALARLRRKLGNGDDADRRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDSAL
RHPPIADCARYDQLRTFDAAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57163; Mature: 57163

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVVRIRREYAGGKAIKAIARDLHVSRKVIRKAIRAPEGAFDYQRKVQPLPRIGPFQDR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHH
LNTLLEENEVRGRRERLRMTRIHDLLEREGFEGSYDAVRRYAARWKADRRKDAGDGVTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
IPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAHMRLCASRAVYVRAYPRESQEMLFDAHA
EEEEECCCCCEEECCCCCCCEECCCCEEEHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC
RGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWEKG
CCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEECCEEECCCCCCCCCCCCCC
QVENQVQTIRGRFFQPRLRFASLDELNGWLEAECQRWAERQAHPEQGELTVAQALEIERS
HHHHHHHHHHHHHCCCHHHHHCHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ALQPMLGPFDGFNESEHAVTGTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEV
HHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQDWDLPPALARLRRKLGNGDDAD
HHHCCHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
RRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDSAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC
RHPPIADCARYDQLRTFDAAA
CCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METVVRIRREYAGGKAIKAIARDLHVSRKVIRKAIRAPEGAFDYQRKVQPLPRIGPFQDR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHH
LNTLLEENEVRGRRERLRMTRIHDLLEREGFEGSYDAVRRYAARWKADRRKDAGDGVTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
IPLMFKPGEAYQFDWSHEDVEIAGKPMRVKVAHMRLCASRAVYVRAYPRESQEMLFDAHA
EEEEECCCCCEEECCCCCCCEECCCCEEEHHHHHHHHHHCEEEEEECCCCHHHHHHHHHC
RGFAFFGGVPGRGIYDNMKTAVTSVFTGKERVFNRRFLIMTDHYMVEPTACSPAAGWEKG
CCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEECCEEECCCCCCCCCCCCCC
QVENQVQTIRGRFFQPRLRFASLDELNGWLEAECQRWAERQAHPEQGELTVAQALEIERS
HHHHHHHHHHHHHCCCHHHHHCHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ALQPMLGPFDGFNESEHAVTGTCLISFDRNRYSVLSTVARRTVQVRAYADRIVVRCGEEV
HHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VAEHPRYFGRNRTIYDPWHYLPVLARKPGALRNGAPFQDWDLPPALARLRRKLGNGDDAD
HHHCCHHHCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
RRFVRVLSAVLTDGLEPVEAAVREALATGTASDDLILNILARRREPPRPLTIITSEDSAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCC
RHPPIADCARYDQLRTFDAAA
CCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]