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The map label for this gene is istB [H]

Identifier: 148550570

GI number: 148550570

Start: 19147

End: 19875

Strand: Direct

Name: istB [H]

Synonym: Swit_5131

Alternate gene names: 148550570

Gene position: 19147-19875 (Clockwise)

Preceding gene: 148550569

Following gene: 148550584

Centisome position: 6.17

GC content: 64.88

Gene sequence:

>729_bases
ATGCAGCGGCATGACATGATCGAGGCGATGCGCGGGCTTGGGCTCAAGGGCATGGCGGGCGCGTTCGACGATGCGGTCAC
CACCGGCCTTCAGCGCCAGCGCACCACGATGGAGATACTGACCGACCTTCTGCGCGCGGAAGCAACACATCGCCATGCTG
CCTCGATCCGATACCGGATGGCGGCCGCCCGGCTGCCGGTCGTGAAGGATATCGATGCGTTCCGGTTCGAGGGCACGCCG
ATCAACGAGGGGCTGGTGCGTTCGCTGCACAGTGGCGCGTTCCTGCCCGCTCGGCGCAACATCGTCCTGGTCGGCGGCAC
GGGCACCGGCAAAACCCACCTGGCCATCGCCATCGCCGCCAATGTCGTTCGCTCGGGTGCGCGAGGCCGCTACTTCAACA
CCGTCGATCTGGTGACCCGCCTCGAAGAGGAGGCCAGGATCGGCAAGAGCGGCGCTCTCGCCGCCCAGCTATCCCGACTC
GACCTGATCGTGCTCGACGAACTGGGATATCTGCCGTTCGCCCGCTCGGGCGGCCAGTTGCTGTTCCACCTGATCAGCAA
GCTCTACGAGCAGACCAGCGTCATCATCACCACCAACCTCGCGTTCGGCGAATGGCCCACCGTGTTCGGCGATCCCAAGA
TGACCACCGCGCTCCTTGATCGCGTCACCCACCATTGCGACATCGTCGAGACCGGCAATGACAGCTGGCGCTTCAAAAAC
CGCAGCTGA

Upstream 100 bases:

>100_bases
GAACCGCCGCGACCGCTCACCATCATCACCTCCGAAGACAGCGCCTTGCGCCATCCGCCGATCGCCGACTGCGCCCGTTA
CGACCAGCTGAGGACCTTCG

Downstream 100 bases:

>100_bases
TCGCCCCCACCGACCTCCGATTAAAAGATGCTTTGCGCTGCGCGCGCCTCCGGTCGGGCTCCGCCCTCCCTACGCCGCGC
GCAGCGCAAAGGCGCGTGTC

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHSGAFLPARRNIVLVGGTGTGKTHLAIAIAANVVRSGARGRYFNTVDLVTRLEEEARIGKSGALAAQLSRL
DLIVLDELGYLPFARSGGQLLFHLISKLYEQTSVIITTNLAFGEWPTVFGDPKMTTALLDRVTHHCDIVETGNDSWRFKN
RS

Sequences:

>Translated_242_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHSGAFLPARRNIVLVGGTGTGKTHLAIAIAANVVRSGARGRYFNTVDLVTRLEEEARIGKSGALAAQLSRL
DLIVLDELGYLPFARSGGQLLFHLISKLYEQTSVIITTNLAFGEWPTVFGDPKMTTALLDRVTHHCDIVETGNDSWRFKN
RS
>Mature_242_residues
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRMAAARLPVVKDIDAFRFEGTP
INEGLVRSLHSGAFLPARRNIVLVGGTGTGKTHLAIAIAANVVRSGARGRYFNTVDLVTRLEEEARIGKSGALAAQLSRL
DLIVLDELGYLPFARSGGQLLFHLISKLYEQTSVIITTNLAFGEWPTVFGDPKMTTALLDRVTHHCDIVETGNDSWRFKN
RS

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 26642; Mature: 26642

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRM
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARLPVVKDIDAFRFEGTPINEGLVRSLHSGAFLPARRNIVLVGGTGTGKTHLAIAIAA
HHHHCCCHHCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
NVVRSGARGRYFNTVDLVTRLEEEARIGKSGALAAQLSRLDLIVLDELGYLPFARSGGQL
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHH
LFHLISKLYEQTSVIITTNLAFGEWPTVFGDPKMTTALLDRVTHHCDIVETGNDSWRFKN
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECC
RS
CC
>Mature Secondary Structure
MQRHDMIEAMRGLGLKGMAGAFDDAVTTGLQRQRTTMEILTDLLRAEATHRHAASIRYRM
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARLPVVKDIDAFRFEGTPINEGLVRSLHSGAFLPARRNIVLVGGTGTGKTHLAIAIAA
HHHHCCCHHCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
NVVRSGARGRYFNTVDLVTRLEEEARIGKSGALAAQLSRLDLIVLDELGYLPFARSGGQL
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHH
LFHLISKLYEQTSVIITTNLAFGEWPTVFGDPKMTTALLDRVTHHCDIVETGNDSWRFKN
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]