| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is csdA [H]
Identifier: 148380762
GI number: 148380762
Start: 2966456
End: 2968030
Strand: Reverse
Name: csdA [H]
Synonym: CBO2802
Alternate gene names: 148380762
Gene position: 2968030-2966456 (Counterclockwise)
Preceding gene: 148380763
Following gene: 148380761
Centisome position: 76.36
GC content: 28.63
Gene sequence:
>1575_bases ATGGAAAATAAAAACTTTGAAAATTTGAACTTAAATGAAGATGTACTAAAAGCTATACAATATATGGGATTTGAAACTCC ATCTGCAATACAAGAAAAATCAATTCCAGTAGTATTAGAAGGAGCAGATGTTATAGCTCAAGCTCAAACAGGAACAGGTA AAACTTTAGCTTTTGGAGCTCCTGTAATAAGCGCTTTGTGTGACAAGGAAAAGAAAAAAGGCGTAAAAGCTTTAGTATTA ACACCTACAAGAGAACTAGCCCTTCAAATAAAAGATGAGCTAAAGAGATTATCTAAATATAGTAAAACAAAAGTACTTCC TGTTTATGGAGGAGAGTCTATAGAAAGACAAATAAAAGATATTAAAAGTGGAGTAGATATAGTGGTTGGAACTCCAGGAA GAATATTAGACCACATTAATAGAAGAACTTTAAAGCTTGGAGGTATTGATTTCCTAATTTTAGACGAAGCAGATGAAATG CTTAATATGGGATTTATAGAAGATATAGAAACTATAATGGAAAGTACTTCTGAAGAAAAACAAACTATGCTTTTTTCAGC TACTATGCCAGCACCTATTAAAAAATTAGCTTTAAACTACATGAAAAAAGATGTAGAGCATATAGCTATATTAAAAAAAT CTTTAACAGTAGATAAAATAGCACAACATTATTTTGCAGTAAAAAATAAAGATAAACTAGAAGCTATATGTAGAATAATA GATTCAGAAGAACCAGAAAGTGCTATAATATTTTGTAGAACAAAAAGAGGCGTTGATGAATTAGTTGAAGCTATGCAATC AAAGGGATACAATGTAGAAGGTATGCATGGAGACATGAGCCAAAATCAAAGAATAAATACTTTGAAAAAATTTAAAAAAG CTACTTTAAACTTTTTAGTTGCAACAGATGTAGCGGCTAGAGGTATAGACGTAGAAAATATATCTCATGTTATAAATTAT GATATACCTCAAGATGCGGAATCCTATGTTCACAGAATAGGAAGAACAGGAAGAGCTGATAAAGAAGGAACAGCCTATTC TTTAGTTACCCCTAGAGAAGTATCTTCTATTAGACAAATAGAAAGAATAATTAAGAGCAAAATCACCAAAAAAGAATTAC CTACTTTAGAGGATATATTAGAAAAGAAATACGATAATTTATTAAATGATATAACTTCTAAAATAGAAGAAAACAAATAT GAAAAATTTATGCCAATGGTAAAAACTTTAGAACAAAATTTTGATTTATCTCAAGTTTCAGCAGCTTTGATGGAAATGTT ATTTAGTAAAGAAATGAGCTTTGATTATACAAATGACAAACTAGAGGCAGAAGTTCCAGTAAGATTATTTTTAAGCGTAG GAAGAAAAGATAGTATAAATGTAAAAAGTTTATTAACATTTATTCAAGATGAAGCCTCTGTAAAAAATCATGAAATTGGA GATATAGATATATTAGATAAATTTACTTTTATGGATGTATCATCAAGCACTGCAGAAAAGATAATAAATAAATGTTCAGG TAAAAAATTAAATAGAAGAAAAGTTAATATCGAAATAGCTAAAAGTAAAAAATAA
Upstream 100 bases:
>100_bases AACAACAACAGATCTTTTAGATAATTAGAAAAGATTTTTTATTGGCTGTTGATTATATGTCAACAGCCATTTTTAATTAA CAACTAGAAAGGAACATTAT
Downstream 100 bases:
>100_bases ATTATTTTAAATTTAGTTATTTAAAGGGGAATTACTAGAGAATTTAGAAGCTAAGAGGTAAATTTTATTTGTTTCTTAGC TTTTGTTATTTTTTGATGTA
Product: ATP-dependent RNA helicase, DEAD/DEAH box family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK
Sequences:
>Translated_524_residues MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK >Mature_524_residues MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDKEKKKGVKALVL TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY EKFMPMVKTLEQNFDLSQVSAALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=39.622641509434, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=38.5416666666667, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI13129006, Length=404, Percent_Identity=37.8712871287129, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=38.7096774193548, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=39.247311827957, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=35.1851851851852, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI301171475, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI87196351, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI224593278, Length=404, Percent_Identity=35.6435643564356, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI169881239, Length=394, Percent_Identity=35.0253807106599, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI13514809, Length=394, Percent_Identity=35.0253807106599, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=36.2397820163488, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=36.2397820163488, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=36.1344537815126, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=36.1344537815126, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=35.73264781491, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=35.8757062146893, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI222352149, Length=343, Percent_Identity=37.9008746355685, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=34.5013477088949, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=35.8381502890173, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=33.9473684210526, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=34.3661971830986, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=34.3661971830986, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=34.3661971830986, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.195530726257, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=34.3661971830986, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=31.989247311828, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=31.989247311828, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=34.6774193548387, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=34.180790960452, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI38327634, Length=403, Percent_Identity=33.0024813895782, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=34.4632768361582, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=34.4632768361582, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=32.010582010582, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=35.7142857142857, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI13514831, Length=389, Percent_Identity=31.1053984575836, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=33.8753387533875, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=33.9331619537275, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=34.2245989304813, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=33.6760925449871, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI17505907, Length=437, Percent_Identity=30.2059496567506, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=33.9622641509434, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=33.7142857142857, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38569503, Length=364, Percent_Identity=30.7692307692308, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI38569505, Length=364, Percent_Identity=30.7692307692308, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI9506931, Length=415, Percent_Identity=27.4698795180723, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI256773275, Length=410, Percent_Identity=28.780487804878, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=33.6336336336336, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI9966805, Length=395, Percent_Identity=27.5949367088608, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI154759257, Length=463, Percent_Identity=25.4859611231102, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=29.2479108635098, Blast_Score=133, Evalue=4e-31, Organism=Escherichia coli, GI87082221, Length=558, Percent_Identity=35.84229390681, Blast_Score=350, Evalue=9e-98, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=41.1140583554377, Blast_Score=308, Evalue=5e-85, Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=36.968085106383, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI1787605, Length=389, Percent_Identity=35.2185089974293, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=38.3098591549296, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI48994977, Length=378, Percent_Identity=24.0740740740741, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=39.5161290322581, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=39.622641509434, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=39.3530997304582, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=37.1273712737127, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI115533224, Length=375, Percent_Identity=38.4, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=36.745406824147, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71995718, Length=396, Percent_Identity=36.1111111111111, Blast_Score=245, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=36.604774535809, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=35.8126721763085, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.9213483146067, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17510559, Length=434, Percent_Identity=33.1797235023041, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17510309, Length=391, Percent_Identity=35.2941176470588, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17510307, Length=391, Percent_Identity=35.2941176470588, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71995514, Length=391, Percent_Identity=35.2941176470588, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=33.7078651685393, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=33.4261838440111, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.3915343915344, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.3915343915344, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507945, Length=390, Percent_Identity=34.6153846153846, Blast_Score=222, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17552642, Length=376, Percent_Identity=34.3085106382979, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.3099730458221, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=33.6158192090396, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=35.3099730458221, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=32.8981723237598, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507881, Length=395, Percent_Identity=31.6455696202532, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=35.2941176470588, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=35.2941176470588, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=35.2941176470588, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17505370, Length=396, Percent_Identity=30.3030303030303, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.6590257879656, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=31.7333333333333, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI193208216, Length=413, Percent_Identity=31.7191283292978, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=29.6103896103896, Blast_Score=161, Evalue=6e-40, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=30.8743169398907, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=28.6472148541114, Blast_Score=151, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=28.0104712041885, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17556951, Length=349, Percent_Identity=29.2263610315186, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148203, Length=430, Percent_Identity=25.3488372093023, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=28.7009063444109, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71982862, Length=216, Percent_Identity=37.5, Blast_Score=128, Evalue=9e-30, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=27.5675675675676, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17557982, Length=432, Percent_Identity=25.6944444444444, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25148205, Length=354, Percent_Identity=23.4463276836158, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=39.0909090909091, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565430, Length=367, Percent_Identity=24.2506811989101, Blast_Score=94, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=38.6920980926431, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=36.0824742268041, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6325138, Length=396, Percent_Identity=35.8585858585859, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=39.3258426966292, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=39.7849462365591, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=39.7849462365591, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=36.0103626943005, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=36.7521367521368, Blast_Score=243, Evalue=7e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=35.5371900826446, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=366, Percent_Identity=37.431693989071, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320449, Length=425, Percent_Identity=34.3529411764706, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6321963, Length=430, Percent_Identity=33.2558139534884, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=36.1878453038674, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6323947, Length=402, Percent_Identity=32.3383084577114, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=32.5905292479109, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=31.5294117647059, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=362, Percent_Identity=33.7016574585635, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320400, Length=396, Percent_Identity=32.8282828282828, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=380, Percent_Identity=29.4736842105263, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=29.4117647058824, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=354, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=28.978622327791, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320173, Length=186, Percent_Identity=35.4838709677419, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=28.2548476454294, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=413, Percent_Identity=26.8765133171913, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321374, Length=400, Percent_Identity=24.75, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323844, Length=349, Percent_Identity=22.9226361031519, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=39.8921832884097, Blast_Score=278, Evalue=7e-75, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=39.3530997304582, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=39.3530997304582, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=39.3530997304582, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=39.3530997304582, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24644487, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI45551833, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644485, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644483, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI281361218, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24644481, Length=393, Percent_Identity=35.6234096692112, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24644479, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=38.3522727272727, Blast_Score=251, Evalue=6e-67, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=36.0433604336043, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=38.5026737967914, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=36.4383561643836, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.2941176470588, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI17985987, Length=401, Percent_Identity=34.9127182044888, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24662330, Length=353, Percent_Identity=36.5439093484419, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=34.3007915567282, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI21356161, Length=463, Percent_Identity=33.4773218142549, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=33.5120643431635, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=33.5120643431635, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.195530726257, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI28575014, Length=417, Percent_Identity=30.4556354916067, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=32.133676092545, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28571808, Length=369, Percent_Identity=31.9783197831978, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI28571809, Length=369, Percent_Identity=31.9783197831978, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=34.5714285714286, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=35.3697749196142, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=28.0542986425339, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571338, Length=421, Percent_Identity=30.8788598574822, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI18859659, Length=421, Percent_Identity=30.8788598574822, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI21355559, Length=397, Percent_Identity=32.4937027707809, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=31.7333333333333, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI17647335, Length=382, Percent_Identity=28.2722513089005, Blast_Score=168, Evalue=9e-42, Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=30.3867403314917, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=27.6923076923077, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI19920478, Length=364, Percent_Identity=25.2747252747253, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI17136666, Length=421, Percent_Identity=24.2280285035629, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=23.9316239316239, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 59058; Mature: 59058
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH PVISALCDKEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTSEEK HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH QTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH ERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK CEEHHCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH PVISALCDKEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTSEEK HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH QTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH ERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK CEEHHCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]