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The map label for this gene is yheN [H]

Identifier: 148380761

GI number: 148380761

Start: 2965505

End: 2966236

Strand: Reverse

Name: yheN [H]

Synonym: CBO2801

Alternate gene names: 148380761

Gene position: 2966236-2965505 (Counterclockwise)

Preceding gene: 148380762

Following gene: 148380760

Centisome position: 76.31

GC content: 26.91

Gene sequence:

>732_bases
ATGAATACTAAGTTTAAAAAATCAATTTATTTACTTTTATTTTTAACTTTAATTTTTAGTGGAGTCATTGCATTTAACTA
TAAAGTTAAGGCTGATAAGAAAGAAGACACAAGTGATAAGAAAGAAATTTATTTAACTTTCGATGATGGTCCTAGTGATA
AAACTACGGAAGATATACTTGATGTGTTAAAAGAAAATGACGTAAAAGCTACTTTCTTTATAATAGGGAAGTATATTGAA
GGTAGAGAGGATGTTCTTAAAAGGATAGTTAAAGAAGGACATAGTTTAGGTTTACACACATATAGTCATAATTATAAGAC
TATATATCAAAATAACAAAGTTTTTATAGATGAAATGTTAAAATGCCAAAATGAAATTTATAAGGCCACAGGAGTTAAAA
CTAATATAATTAGATTTCCTGGGGGAAGCGTAAAAAGATTAGATGAAAGATTTAAAAAGGAATTAGAAGATGAAGGCTTT
AAAATATATGATTGGAATATGGCATTAACAGATGGTATAAATCCTAGGTCACCTGTAAGTAAATTTTGTAAAGAGGGAAC
TAAAAGAAAGAAACCATTATCCAAAGTTATACTACTCGCCCATTGTGATCATTTAAATAAAAATACCTGTAGAGCTTTAC
CAGATATAATTAAGTTTTATAAAGATAAAGGCTATGAATTTAAAATTATCGATAAGAATACTCCAGAATTCGTATTTCCT
TATAGAAAATAG

Upstream 100 bases:

>100_bases
AAAAATTAAAGGAGAATAATTTAATTAATAATACTAATACTAAAAAAATATAGTAATCCTAAATACTAATATAACAAAAA
TTTAGGAGGGATATGTTTAA

Downstream 100 bases:

>100_bases
AAATGATTGGTAATAACTTTAATTTTATTCATATTTTATTTTTGAAGTTAACATTAATATATAACCAAGATATTAAAAAA
TAAATTTATTATAGGTTTTA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEDTSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYKTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEDEGF
KIYDWNMALTDGINPRSPVSKFCKEGTKRKKPLSKVILLAHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK

Sequences:

>Translated_243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEDTSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYKTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEDEGF
KIYDWNMALTDGINPRSPVSKFCKEGTKRKKPLSKVILLAHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK
>Mature_243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEDTSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYKTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEDEGF
KIYDWNMALTDGINPRSPVSKFCKEGTKRKKPLSKVILLAHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=133, Percent_Identity=34.5864661654135, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28382; Mature: 28382

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEDTSDKKEIYLTFDDGPSDKTTEDIL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHH
DVLKENDVKATFFIIGKYIEGREDVLKRIVKEGHSLGLHTYSHNYKTIYQNNKVFIDEML
HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCEEHHHHHH
KCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEDEGFKIYDWNMALTDGINPRSPVS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECEEEECCCCCCCHHH
KFCKEGTKRKKPLSKVILLAHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
HHHHCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECC
YRK
CCC
>Mature Secondary Structure
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEDTSDKKEIYLTFDDGPSDKTTEDIL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHH
DVLKENDVKATFFIIGKYIEGREDVLKRIVKEGHSLGLHTYSHNYKTIYQNNKVFIDEML
HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCEEHHHHHH
KCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEDEGFKIYDWNMALTDGINPRSPVS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECEEEECCCCCCCHHH
KFCKEGTKRKKPLSKVILLAHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
HHHHCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECC
YRK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]