| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is gamP [H]
Identifier: 148380712
GI number: 148380712
Start: 2904478
End: 2906433
Strand: Reverse
Name: gamP [H]
Synonym: CBO2754
Alternate gene names: 148380712
Gene position: 2906433-2904478 (Counterclockwise)
Preceding gene: 148380713
Following gene: 148380711
Centisome position: 74.77
GC content: 29.65
Gene sequence:
>1956_bases TTGAAAAATATTTTAACTATTCTTCAGAGGGTAGGAAAATCCTTAATGCTACCTGTATCCGTATTACCTGCAGCAGCTAT ACTTTTAAGATTAGGGTATCCAGATCTTTTAAATAATATGTATATGTTAAAAGCGGGAGATGCTATATTTAGCAATCTTC CATTAATATTTGCTATAGGAGTTTCAGTAGGCCTTTCAGATGGGGAAGGAATAGCAGCTTTAGCTGCTATAGTAGGTCAA TTAATGTTGCAGGGTATATTGAATGTTGGAAGTTCAAAGGCAGCCAAAGAAGCAGCTATAAAAGTAGCTGCCCAAAAGAA TATGACTTTAGAAGCTTTTATGAATAGCAAATTTTATGATGATATATTAAGAAGTACCAATATAGATTTGGGTGTTTTTG GTGGAATAATAATAGGCATTATAGCTGCAATTATATACAATAAATATAAAAACATAAAGCTACCCAGTACTATAGGTTTT TTTGGGGGAAAACGGTTTGTGCTTATTCTTACAGCTATAATATCCTTTATGTTTGGAATGATTAATGTAGTAATATGGCC AGAGGTACAAAAGAATATTGATACTTTTGCTAGATTTGCCACTACATCTCCTTTAGGACCAGCTTTTTATGCAGCAGGAA AAAGACTTTTAATTCCACTAGGACTTCATCATATATACTATCCACCTTTTTTATATCAATTTGGTAGTTATGTAGATCCT AGCGGAATTAAATATTTTGGGGATTTTTCAAGGTATTTTCATGGAGATCCTACAGCAGGAGTTTTTATGGCTTCAGAGTT TCCTATATTAATGTTTGGGCTTCCAGGAGCAGCTATAGCTATGATTTGTGCCGCAGAAAAACAAAATAGAAAGAAAGCTC TTAGCATAATGCTATCTGCTGCTTTAGTGTCTTTTTTTACAGGTATTACAGAACCTATAGAATTTGCTTTTATATTTGTA GCACCTATATTATTTATTTTTCATGTTGCAGCAGCTTTTACAGCAGGCATAGTAACTAGTATTTTTAATATAAAACTAGG TTATACTTTTTCAGCTTCTTTTATAGATTATATTTTAGGATATAAGTTTTCTCAAAATGGATTACTAATATTCCCTATAG GCATTTTTTATTTTTTATTATATTTTATAGTCTTTTACTATCTAATAATAAAAAAAGATATAAAAACATTAGGAAGAGAA GGCATAATACTTAAAGAAAATAAAGAAATAAAAAGTAATGAAAAAGCAGCCTTAATATTAGAAGCTCTAGGAGGAGAAAA AAATATAATAAATTTAGATTGTTGTATAACAAGACTTAGGGTAGCTTTAAAGGACGAAAAAAAATTAGACAGGGCTTATT TAGAAAAAATAAATTTATTAGGTATAGTGCAGACAGGAAAAGTGGCACAAATAATATTAGGTACAGAAGCAGAAAATATA AAATATAGTATAGAGCAAATAATTAAAAAAGGAATGAATCCAAAGGAAATAATAGAATATGAAAGAGCATTAAAATTAAT GAATCCTATGGAAGGAGAAATAGTTGCCTTAGAAGAGGTGCCAGATGAGGTTTTTTCAGAAAAATTATTAGGCGATGGAT TTGCCATAAAGCCCTATAAAAATAAGGTGTATTCTCCTGTGGACGGAATTATAAAATTTTTATTTCCTAGTAATCATGCC TTAGCTATAGAAACTGAGGAAGGTTTAGAGATTTTAATACATATAGGTATAGATACTGTAAACCTTAATGGGGAAGGATT TAAAGTTTATATAAAAGAAAAAGAAAAGGTTAAAAAGGGCCAACTTTTAGTAAGTTATGATAAAGAGTTTTTAGGTAGAG AGGCTAAAAGTTTAATATCGCCTATAGTAATAACAAATTTAAAAGAAAGCTCAGAAGTAAAAATAGAATATGGTTATAAA AAAGAAAAAGAAATAGTAGCTTATATTAAGAATTAA
Upstream 100 bases:
>100_bases AGGATAGGGCAATATTAAGGTATATTAAATATATAAACTAAAAAACCTTGCTTTTGCAAGGTTTTTAAACTATAAGCAAG CTTAAAGGTGGTGTGTAAAA
Downstream 100 bases:
>100_bases TATGAAAATTGTTAAAATTATAATGACTATAATAATTATTTTATAATTATTATCTACATTATTTATTAAGAATTACGAAA ATAATAAAAGAGTATGTTTA
Product: PTS system, glucose family, IIABC component
Products: NA
Alternate protein names: Glucosamine permease IIC component; PTS system glucosamine-specific EIIC component; Glucosamine-specific phosphotransferase enzyme IIB component; PTS system glucosamine-specific EIIB component; Glucosamine-specific phosphotransferase enzyme IIA component; PTS system glucosamine-specific EIIA component [H]
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MKNILTILQRVGKSLMLPVSVLPAAAILLRLGYPDLLNNMYMLKAGDAIFSNLPLIFAIGVSVGLSDGEGIAALAAIVGQ LMLQGILNVGSSKAAKEAAIKVAAQKNMTLEAFMNSKFYDDILRSTNIDLGVFGGIIIGIIAAIIYNKYKNIKLPSTIGF FGGKRFVLILTAIISFMFGMINVVIWPEVQKNIDTFARFATTSPLGPAFYAAGKRLLIPLGLHHIYYPPFLYQFGSYVDP SGIKYFGDFSRYFHGDPTAGVFMASEFPILMFGLPGAAIAMICAAEKQNRKKALSIMLSAALVSFFTGITEPIEFAFIFV APILFIFHVAAAFTAGIVTSIFNIKLGYTFSASFIDYILGYKFSQNGLLIFPIGIFYFLLYFIVFYYLIIKKDIKTLGRE GIILKENKEIKSNEKAALILEALGGEKNIINLDCCITRLRVALKDEKKLDRAYLEKINLLGIVQTGKVAQIILGTEAENI KYSIEQIIKKGMNPKEIIEYERALKLMNPMEGEIVALEEVPDEVFSEKLLGDGFAIKPYKNKVYSPVDGIIKFLFPSNHA LAIETEEGLEILIHIGIDTVNLNGEGFKVYIKEKEKVKKGQLLVSYDKEFLGREAKSLISPIVITNLKESSEVKIEYGYK KEKEIVAYIKN
Sequences:
>Translated_651_residues MKNILTILQRVGKSLMLPVSVLPAAAILLRLGYPDLLNNMYMLKAGDAIFSNLPLIFAIGVSVGLSDGEGIAALAAIVGQ LMLQGILNVGSSKAAKEAAIKVAAQKNMTLEAFMNSKFYDDILRSTNIDLGVFGGIIIGIIAAIIYNKYKNIKLPSTIGF FGGKRFVLILTAIISFMFGMINVVIWPEVQKNIDTFARFATTSPLGPAFYAAGKRLLIPLGLHHIYYPPFLYQFGSYVDP SGIKYFGDFSRYFHGDPTAGVFMASEFPILMFGLPGAAIAMICAAEKQNRKKALSIMLSAALVSFFTGITEPIEFAFIFV APILFIFHVAAAFTAGIVTSIFNIKLGYTFSASFIDYILGYKFSQNGLLIFPIGIFYFLLYFIVFYYLIIKKDIKTLGRE GIILKENKEIKSNEKAALILEALGGEKNIINLDCCITRLRVALKDEKKLDRAYLEKINLLGIVQTGKVAQIILGTEAENI KYSIEQIIKKGMNPKEIIEYERALKLMNPMEGEIVALEEVPDEVFSEKLLGDGFAIKPYKNKVYSPVDGIIKFLFPSNHA LAIETEEGLEILIHIGIDTVNLNGEGFKVYIKEKEKVKKGQLLVSYDKEFLGREAKSLISPIVITNLKESSEVKIEYGYK KEKEIVAYIKN >Mature_651_residues MKNILTILQRVGKSLMLPVSVLPAAAILLRLGYPDLLNNMYMLKAGDAIFSNLPLIFAIGVSVGLSDGEGIAALAAIVGQ LMLQGILNVGSSKAAKEAAIKVAAQKNMTLEAFMNSKFYDDILRSTNIDLGVFGGIIIGIIAAIIYNKYKNIKLPSTIGF FGGKRFVLILTAIISFMFGMINVVIWPEVQKNIDTFARFATTSPLGPAFYAAGKRLLIPLGLHHIYYPPFLYQFGSYVDP SGIKYFGDFSRYFHGDPTAGVFMASEFPILMFGLPGAAIAMICAAEKQNRKKALSIMLSAALVSFFTGITEPIEFAFIFV APILFIFHVAAAFTAGIVTSIFNIKLGYTFSASFIDYILGYKFSQNGLLIFPIGIFYFLLYFIVFYYLIIKKDIKTLGRE GIILKENKEIKSNEKAALILEALGGEKNIINLDCCITRLRVALKDEKKLDRAYLEKINLLGIVQTGKVAQIILGTEAENI KYSIEQIIKKGMNPKEIIEYERALKLMNPMEGEIVALEEVPDEVFSEKLLGDGFAIKPYKNKVYSPVDGIIKFLFPSNHA LAIETEEGLEILIHIGIDTVNLNGEGFKVYIKEKEKVKKGQLLVSYDKEFLGREAKSLISPIVITNLKESSEVKIEYGYK KEKEIVAYIKN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=674, Percent_Identity=36.646884272997, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1787343, Length=498, Percent_Identity=41.7670682730924, Blast_Score=346, Evalue=3e-96, Organism=Escherichia coli, GI1787908, Length=515, Percent_Identity=29.126213592233, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1788757, Length=131, Percent_Identity=47.3282442748092, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1790159, Length=138, Percent_Identity=40.5797101449275, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 72146; Mature: 72146
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILTILQRVGKSLMLPVSVLPAAAILLRLGYPDLLNNMYMLKAGDAIFSNLPLIFAIG CCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCHHHHCCEEEEEECCHHHHCCCEEEEEE VSVGLSDGEGIAALAAIVGQLMLQGILNVGSSKAAKEAAIKVAAQKNMTLEAFMNSKFYD CCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHH DILRSTNIDLGVFGGIIIGIIAAIIYNKYKNIKLPSTIGFFGGKRFVLILTAIISFMFGM HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH INVVIWPEVQKNIDTFARFATTSPLGPAFYAAGKRLLIPLGLHHIYYPPFLYQFGSYVDP HHEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECHHHHCCCHHHHHHCCCCCC SGIKYFGDFSRYFHGDPTAGVFMASEFPILMFGLPGAAIAMICAAEKQNRKKALSIMLSA CCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH ALVSFFTGITEPIEFAFIFVAPILFIFHVAAAFTAGIVTSIFNIKLGYTFSASFIDYILG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEECHHHHHHHHC YKFSQNGLLIFPIGIFYFLLYFIVFYYLIIKKDIKTLGREGIILKENKEIKSNEKAALIL CEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE EALGGEKNIINLDCCITRLRVALKDEKKLDRAYLEKINLLGIVQTGKVAQIILGTEAENI ECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCHH KYSIEQIIKKGMNPKEIIEYERALKLMNPMEGEIVALEEVPDEVFSEKLLGDGFAIKPYK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHCCCEEECCCC NKVYSPVDGIIKFLFPSNHALAIETEEGLEILIHIGIDTVNLNGEGFKVYIKEKEKVKKG CCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECEEEEEECCCCEEEEEECHHHHCCC QLLVSYDKEFLGREAKSLISPIVITNLKESSEVKIEYGYKKEKEIVAYIKN CEEEEECHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCCCCCCEEEECC >Mature Secondary Structure MKNILTILQRVGKSLMLPVSVLPAAAILLRLGYPDLLNNMYMLKAGDAIFSNLPLIFAIG CCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCHHHHCCEEEEEECCHHHHCCCEEEEEE VSVGLSDGEGIAALAAIVGQLMLQGILNVGSSKAAKEAAIKVAAQKNMTLEAFMNSKFYD CCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHH DILRSTNIDLGVFGGIIIGIIAAIIYNKYKNIKLPSTIGFFGGKRFVLILTAIISFMFGM HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH INVVIWPEVQKNIDTFARFATTSPLGPAFYAAGKRLLIPLGLHHIYYPPFLYQFGSYVDP HHEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECHHHHCCCHHHHHHCCCCCC SGIKYFGDFSRYFHGDPTAGVFMASEFPILMFGLPGAAIAMICAAEKQNRKKALSIMLSA CCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH ALVSFFTGITEPIEFAFIFVAPILFIFHVAAAFTAGIVTSIFNIKLGYTFSASFIDYILG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEECHHHHHHHHC YKFSQNGLLIFPIGIFYFLLYFIVFYYLIIKKDIKTLGREGIILKENKEIKSNEKAALIL CEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE EALGGEKNIINLDCCITRLRVALKDEKKLDRAYLEKINLLGIVQTGKVAQIILGTEAENI ECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCHH KYSIEQIIKKGMNPKEIIEYERALKLMNPMEGEIVALEEVPDEVFSEKLLGDGFAIKPYK HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHCCCEEECCCC NKVYSPVDGIIKFLFPSNHALAIETEEGLEILIHIGIDTVNLNGEGFKVYIKEKEKVKKG CCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECEEEEEECCCCEEEEEECHHHHCCC QLLVSYDKEFLGREAKSLISPIVITNLKESSEVKIEYGYKKEKEIVAYIKN CEEEEECHHHHHHHHHHHHCCHHEECCCCCCCEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 7751298 [H]