| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yeeE [H]
Identifier: 148379541
GI number: 148379541
Start: 1705184
End: 1705879
Strand: Direct
Name: yeeE [H]
Synonym: CBO1575
Alternate gene names: 148379541
Gene position: 1705184-1705879 (Clockwise)
Preceding gene: 148379540
Following gene: 148379542
Centisome position: 43.87
GC content: 26.44
Gene sequence:
>696_bases ATGTCTAAGGATATAGACTTACTTATTGAAAAAAGACATAATGATCATAAAGTGTATATAAAGAGGAAAAATCAAATTCC ACAGGCAATAAGTATATGTATAATAAGTTTACTAGTAGGTTTTGTTCTATGGAAAATAAATGCTAACAATGTTTTTTATT GGTCTATAGGCATAGCTATTGGTTTTGTATTAAGAAAATCTAGATTTTGTTTATGTGGAGCTTTTAGAGACCCTTTTTTG TTTAATAATACAAAGCTTTTAAGAGGAGTAATAATAACTATTATAATTAATACTATAGGCTTTGGAATAATACAGTATTA TTATACTAAAGGAAATATTATAAATTATGACAATATTCCTGGAAATGTTACTTCCTTTGGATGGCATATAGCTATAGGAG CTTTTATTTTTGGTATAGGCATGGTTATAGCTGGTGGTTGTGCATCAGGGATACTTATGAGAATAGGTGAGGGACATGCT CTTCCTTGGATAGTATTTATAGGAATGATAATTGGTAATCTTTTAGGAGCTAAAGATTATTCCTTTTGGTATGATAAAAT TATTAAAAATTCAAAGGTTATTTATTTTCCTGAATATATGGATATAAGAATTGCAATAGCAGTACAAATAATTATACTTA TAATTATATATAAATTCCTTTCTTTTAGAGAAAAGAGAAATTTTGAAAAAAAGTAA
Upstream 100 bases:
>100_bases ACTATTTTTATTAATATATTAAAATAAATGTATATTTATAAATTTCAAATAATGAATAAATAAAAAGAAAAAACATTAAT ATTTTTATAAGGGGGATAAT
Downstream 100 bases:
>100_bases TGGAGGCACAGTTATGGAAGTAAAGGATTTAGATTGTCTATATGAGCCCTGCCCAATACCTTTAGTTAGAGCAAGTCAAG AATTAAAAAAAATGAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSKDIDLLIEKRHNDHKVYIKRKNQIPQAISICIISLLVGFVLWKINANNVFYWSIGIAIGFVLRKSRFCLCGAFRDPFL FNNTKLLRGVIITIIINTIGFGIIQYYYTKGNIINYDNIPGNVTSFGWHIAIGAFIFGIGMVIAGGCASGILMRIGEGHA LPWIVFIGMIIGNLLGAKDYSFWYDKIIKNSKVIYFPEYMDIRIAIAVQIIILIIIYKFLSFREKRNFEKK
Sequences:
>Translated_231_residues MSKDIDLLIEKRHNDHKVYIKRKNQIPQAISICIISLLVGFVLWKINANNVFYWSIGIAIGFVLRKSRFCLCGAFRDPFL FNNTKLLRGVIITIIINTIGFGIIQYYYTKGNIINYDNIPGNVTSFGWHIAIGAFIFGIGMVIAGGCASGILMRIGEGHA LPWIVFIGMIIGNLLGAKDYSFWYDKIIKNSKVIYFPEYMDIRIAIAVQIIILIIIYKFLSFREKRNFEKK >Mature_230_residues SKDIDLLIEKRHNDHKVYIKRKNQIPQAISICIISLLVGFVLWKINANNVFYWSIGIAIGFVLRKSRFCLCGAFRDPFLF NNTKLLRGVIITIIINTIGFGIIQYYYTKGNIINYDNIPGNVTSFGWHIAIGAFIFGIGMVIAGGCASGILMRIGEGHAL PWIVFIGMIIGNLLGAKDYSFWYDKIIKNSKVIYFPEYMDIRIAIAVQIIILIIIYKFLSFREKRNFEKK
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=177, Percent_Identity=25.4237288135593, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 26414; Mature: 26283
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDIDLLIEKRHNDHKVYIKRKNQIPQAISICIISLLVGFVLWKINANNVFYWSIGIAI CCCCHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHH GFVLRKSRFCLCGAFRDPFLFNNTKLLRGVIITIIINTIGFGIIQYYYTKGNIINYDNIP HHHHHHCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCC GNVTSFGWHIAIGAFIFGIGMVIAGGCASGILMRIGEGHALPWIVFIGMIIGNLLGAKDY CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCH SFWYDKIIKNSKVIYFPEYMDIRIAIAVQIIILIIIYKFLSFREKRNFEKK HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKDIDLLIEKRHNDHKVYIKRKNQIPQAISICIISLLVGFVLWKINANNVFYWSIGIAI CCCHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHH GFVLRKSRFCLCGAFRDPFLFNNTKLLRGVIITIIINTIGFGIIQYYYTKGNIINYDNIP HHHHHHCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCC GNVTSFGWHIAIGAFIFGIGMVIAGGCASGILMRIGEGHALPWIVFIGMIIGNLLGAKDY CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCH SFWYDKIIKNSKVIYFPEYMDIRIAIAVQIIILIIIYKFLSFREKRNFEKK HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]